Shigella flexneri 8401 (serotype 5b): SFV_0878
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Entry
SFV_0878 CDS
T00377
Symbol
cydD
Name
(GenBank) ATP-binding component of cytochrome-related transport
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SFV_0878 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfv02000
]
SFV_0878 (cydD)
Transporters [BR:
sfv02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SFV_0878 (cydD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_16
Zeta_toxin
nSTAND1
Dynamin_N
AAA_23
AAA_15
DUF815
DUF2813
AAA_25
AIG1
Motif
Other DBs
NCBI-ProteinID:
ABF03103
UniProt:
Q0T8N5
LinkDB
All DBs
Position
complement(914661..916427)
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AA seq
588 aa
AA seq
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MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPRE
ALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAG
SWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFM
ALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTM
EVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEF
FQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSP
EGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPES
WRKHLSWVGQNPQLPAAKLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVG
DQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMV
THQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctcgtcaaaaagagttaacccgctggttaaaacagcaaagcgtcatctcc
caacgttggctgaatatttctcgtctgctgggctttgtaagcggcatattgatcattgcc
caggcctggttcatggcgcgaattctgcaacatatgattatggagaatattccccgtgaa
gccctgctgcttccctttacgttactggttctgacctttgtattgcgcgcatgggtggtc
tggttacgcgaacgggtgggttatcacgccgggcagcatatccgctttgccatccgccgt
caggttctcgaccgtctgcaacaagcagggccagcgtggattcagggtaaacctgcgggg
agctgggcgacgctggtactcgagcaaattgacgatatgcatgattactatgcacgctat
ctgccgcaaatggcgctggcagtgtcggtgccgttgctgattgtggtggcgatcttcccc
tctaactgggctgcggcgctcattctgctgggcacagcaccgctaattccgttgtttatg
gcgctggttggaatgggggctgccgatgctaaccggcgtaactttctcgctcttgctcgc
ttaagtgggcatttcctcgatcgcctgcgcggcatggaaacattgcgtatttttggtcgt
ggtgaagctgaaattgaaagtattcgttctgcttcggaagatttccgccaacggacaatg
gaagtgctacgactggcgtttttatcctccggcattctcgaattttttacctcgctgtca
attgctctggtggcggtctactttggtttttcctatctcggcgagctggattttggtcac
tacgatactggggtgacgctggctgcaggttttctggccctgatccttgcgccagagttt
ttccagccattacgcgatctcggtacgttttatcatgctaaagcccaggctgttggtgca
gctgacagtctgaaaacgtttatggaaaccccgctcgcccatccgcagcgcggtgaggcg
gaattagcattgaccgatccgctgaccattgaggccgaggatctgtttatcacgtcgccg
gaaggtaaaacgctggccggaccgctgaactttactttgccagcaggccaacgtgcagtg
ttggttggccgcagcggttcaggtaaaagctcactgctgaacgcgctttctggttttctc
tcatatcagggatcattacgaatcaacgggatagaattacgtgatttatcaccagaatca
tggcgtaaacatctctcctgggttgggcaaaacccacaattaccggcagcaaaattgcgg
gataacgtactactggcgcgacctgatgccagcgaacaagaattacaagcagcgctggat
aacgcttgggtcagcgagtttctaccgctcctgccacaaggcgttgatacacctgttggc
gaccaggctgcccgcctttccgtggggcaggcgcagcgcgtggcggtggcccgtgcgtta
ctaaatccctgttcgctattactgttggatgaacccgctgccagccttgatgctcacagt
gaacagcgcgtaatggaggcgctgaatgccgcctctctgcgccagacaacgttaatggtc
acccaccagttagaagatcttgctgactgggatgtcatttgggttatgcaggatggccgg
attattgagcaaggacgttacgcggaattaagtgtggctggtggcccattcgccacatta
ctggcccatcgtcaggaggagatttaa
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