Shigella flexneri 8401 (serotype 5b): SFV_0905
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Entry
SFV_0905 CDS
T00377
Symbol
ycaO
Name
(GenBank) conserved hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfv03009
]
SFV_0905 (ycaO)
Ribosome biogenesis [BR:
sfv03009
]
Prokaryotic type
ribosomal protein modification factors
SFV_0905 (ycaO)
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
ABF03128
UniProt:
Q0T8I7
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All DBs
Position
complement(944227..946020)
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AA seq
597 aa
AA seq
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MRAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIR
DKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWF
PLSENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYI
PMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYSA
VVEAIETLETEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVT
ELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFS
GTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSH
LRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKA
MLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFV
RMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgctttccgtacgactaaagtgattttcatgacgcaaacatttatccccggcaaa
gatgccgctctggaagattccatcgctcgcttccagcaaaaactttcagacctcggcttt
cagattgaagaggcctcctggctgaatcccgtgcctaacgtctggtctgtacatattcgc
gacaaagagtgcgcactgtgttttaccaacggtaaaggcgcaaccaagaaagcggcgctg
gcttctgcactcggtgaatatttcgagcgtctctcaaccaactacttttttgctgatttc
tggctgggcgaaaccatcgccaacggtccatttgtgcattatcccaacgaaaaatggttc
ccactgagcgaaaatgacgatgtgccagaagggctgctcgatgaccgtctgcgcgcattt
tacgatccggagaatgaattgaccggcagtatgctgattgacctacaatccggtaacgaa
gatcgtggtatttgcggtctgccgtttacgcgccagtccgacaatcagaccgtttatatt
ccgatgaatatcattggtaacctgtacgtttctaacggtatgtccgctggcaatacccgc
aacgaagcacgcgttcaggggttgtccgaagttttcgaacgctacgtgaaaaaccgcatt
attgctgaaagcatcagcttgccggaaatcccggcagacgtgctggcgcgttactcagcg
gtggttgaagcgatcgaaacactggaaacagaaggtttcccgatcttcgcatatgatggt
tcccttggcggccagtatccggtgatttgcgtggtactgtttaatcctgcaaacggcacc
tgctttgcctctttcggtgcgcatcctgattttggcgtagcactggaacgtaccgtgacc
gagctgctgcaaggtcgtggcctgaaagatttggatgtgtttactccgccaaccttcgat
gatgaagaagtcgctgaacataccaacctcgaaacgcactttatcgattccagcggttta
atctcctgggacctgttcaagcaggatgccgattatccgtttgtggactggaatttctcc
ggcaccacggaagaagagtttgctacgctgatggctatcttcaacaaagaagataaagaa
gtttatattgccgattacgagcatctgggcgtttatgcttgccgtattatcgtgcctggc
atgtccgatatttatccggctgaagatctgtggctcgcgaataacagtatgggcagccat
ttacgtgaaacgattctttcgctaccaggcagcgagtgggaaaaagaagattacctgaac
ctcatcgagcaactggatgaagaaggttttgatgactttacccgcgtgcgtgagctgttg
ggtctggcgaccgggtcggataacggttggtacaccctgcgtatcggtgaattaaaagcc
atgctggcgctggctggtggcgatctggaacaggctctggtctggaccgaatggacgatg
gagtttaactcatcagtatttagtccggaacgcgccaactattatcgctgcctgcaaacg
ttgttattactggcacaggaagaagatcgccagccgctgcaatatctgaatgcgtttgtt
cgcatgtacggcgcagatgccgtagaagccgccagtgcggcaatgagcggcgaagcggcg
ttttacggcctgcaaccggtagatagcgatctgcacgcgtttgctgcacatcagtcgttg
ttgaaggcctacgaaaagctgcagcgcgccaaagcagcattctgggcaaaataa
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