Shigella flexneri 8401 (serotype 5b): SFV_2062
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Entry
SFV_2062 CDS
T00377
Symbol
erfK
Name
(GenBank) conserved hypothetical protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfv01002
]
SFV_2062 (erfK)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfv01011
]
SFV_2062 (erfK)
Peptidases and inhibitors [BR:
sfv01002
]
Cysteine peptidases
Family C82
SFV_2062 (erfK)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SFV_2062 (erfK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
ABF04190
UniProt:
Q0T3C5
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All DBs
Position
complement(2082003..2082938)
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AA seq
311 aa
AA seq
DB search
MMRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTIPDHNTQPLETFAAQYGQ
GLSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEV
FPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGL
YAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLREFINGQEVDVNRANAALQHRSGMP
VQISSGSRQMF
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtcgtgtaaatattctttgctcatttgctctgctttttgccagccaaaatagc
ctggcggtaacttatccattacctccagagggtagccgtttagtggggcagtcgcttact
gtaactattcctgatcacaatactcagccgctggagacttttgccgcacaatacgggcaa
gggttaagtaatatgctggaagcgaatccgggcgctgatgtttttttgccgaagcctggc
tcacaactcaccattccgcagcaactgattttgcccgccactgttcgtaaagggattgtg
gttaacgtcgctgaaatgcgtctttattactatccgccagacagtaatacagtggaagtc
tttcctattggtatcggccaggctgggcgagaaaccccgcgtaactgggtgactaccgtt
gaacgtaaacaagaagcaccaacttggacgccaacgccgaacacccggcgcgaatatgcg
aaacgaggggagagtttgcccgcatttgttcctgcggggcccgataaccccatggggctg
tacgcgatttatattggcaggttgtatgccatccacggtaccaatgccaattttggtatt
gggctccgtgtaagtcagggctgtattcgtctgcgtaatgacgatatcaaatatctgttt
gataatgttcctgtaggcactcgtgtacaaattattgatcagccagtgaaatacacaacg
gaaccggatggttcaaagtggctggaagttcatgagccgctgtcgcgcaatcgtgcagaa
tatgagtctgaccgaaaagtgccattgccggtaaccccatctttgcgggagtttatcaac
gggcaagaagttgatgtaaatcgcgcaaatgctgcgttgcaacatcgatcgggaatgcct
gtgcaaattagttctggttcaagacagatgttttaa
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