Streptomyces fagopyri: GFH48_15150
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Entry
GFH48_15150 CDS
T06986
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03420
Nucleotide excision repair
sfy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GFH48_15150
03430 Mismatch repair
GFH48_15150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_15150
Enzymes [BR:
sfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH48_15150
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFH48_15150
MMR (mismatch excision repair)
Other MMR factors
GFH48_15150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QFZ74415
UniProt:
A0A5Q0LBJ3
LinkDB
All DBs
Position
complement(3500664..3504275)
Genome browser
AA seq
1203 aa
AA seq
DB search
MWHPLSVGAASLSDVPARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTT
VMAARVVWLVGTGQVAPEQVLGLTFTNKAAGELAERVRKALIRAGVTDPDVIDPDNPPGE
PVISTYHAFAGRLLTDHGLRIGLEPTSRLLADATRYQLAARVLRESPGPYPALTRSFPDL
VGDLLTLDSELAEHLVRPEDLRAHDAALLRALESAKLTNADLRKVPEAAAARRELAELVV
RYRAAKRERDLLDFGDQIALSATLARTRPEVGGILRDEFRVVLLDEYQDTSVAQRVLLAG
LFGAGTGHPVTAVGDPCQAIYGWRGASVANLDDFPEHFAHADGRPATRQSLSENRRSGGR
LLDLANGLAEPLRAMHAGVEALRPAPGAEHDGVVHCALLPTHAEEIDWLADSLAHLVRTG
KAPGEIAVLCRTAGDFAEIQGALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGAN
ASLVRLLTGPRWRIGPRDLALLGRRARLLVSHTRVGADDDADRRLAAAVEGVDPAEVISL
ADALDTFLEMPVEAGRDDGLPFSPDARVRFARLATELRDLRRSLADPLMDVLHRVLAVTG
LEVELSASPHALAARRRETLSNFLDAAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNAL
PGGENTVKVLTAHKSKGLEWDVVAVPGLVTGTFPSTQGREKWTAQGKVLPHELRGDADTL
PDIDTWDAKGIKAFHEAMKDHQRTEELRLGYVTFTRPRSLLLGSGHWWGPSQKRPRGPSD
FLHALYDHCAAGHGEIEAWADEPAEDEDNPALHEAAADHAWPLPLDDTALARRRAAAETV
LAHLERVASHEDPHPAAHDPSSHDDPEWPPPPDDDETPFADEFPPEENDALPEDDGTVLV
ADDDLPVGDDSDWDSWTTHRPTLPHQAPAPETRPAPGPPGTQDGRPHPQDAPVRLTPEET
RTLASWDRDLDALTGELQRARASVTDVPLPASLTASQVLHLAADPDGFAQELARPMPRPP
QPAARRGTRFHAWVESRFEELRLPMLEPEDLPGSDAEIADERDLEDLKDAFERTPYAHRT
PHRVETPFQLTIAGRVVRGRIDAVYKEDDGDGTTYEIVDWKTSRTRTADPLQLAVYRLAW
AEQQGVPPEAVKATFVYIRSGEIVRPRNLPDRAALERLLTQDTRDPRQEPAEEPPDRHTS
AGG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atctggcacccgctgtcagtgggcgcggctagcctctctgacgtgcccgcccgtatcacc
gatcccgagcagctcaaggagctcctcggcatccccttcaccccggagcagacggcctgc
atcaccgcaccgcccgccccgcaggtgatcgtggccggagccggatccgggaagaccacg
gtgatggcggcacgcgtggtctggctcgtcggcacgggacaggtcgcccccgaacaggtc
ctcggcctgacgttcaccaacaaggccgcgggcgaactcgccgaacgcgtccgcaaggca
ctcatcagggccggcgtcaccgacccggacgtgatcgaccccgacaatccgcccggcgaa
cccgtcatctccacctaccacgccttcgccggccgcctgctgaccgaccacggactgcgc
atcggcctcgaaccgacgtcccgcctgctcgccgacgccacccgctaccagctcgccgcc
cgcgtcctgcgcgagtcacccggaccgtacccggcactcacccgctccttccccgacctc
gtcggcgacctcctcaccctcgactccgaactcgccgaacacctcgtacgccccgaggac
ctgcgcgcccacgacgccgcactgctgcgcgccctggagagcgccaaactcaccaacgcc
gacctccgcaaggtccccgaggcagccgccgcccggcgcgaactcgccgaactggtcgtc
cgctaccgcgcggccaaacgcgaacgcgacctcctcgacttcggtgaccagatcgccctc
tcggccaccctggcccgcacccgccccgaggtcgggggcatcctccgcgacgagttccgc
gtggtcctgctcgacgagtaccaggacacctcggtggcgcagcgcgtactgctcgccgga
ctcttcggagccggcacgggacaccccgtgaccgcggtcggcgacccgtgccaggccatc
tacggctggcgcggcgcctccgtcgccaacctcgacgacttccccgaacacttcgcgcac
gccgacggccgccccgccacccgccagtcactcagcgagaaccgccgcagcggcggccgc
ctcctcgacctcgccaacggcctcgccgaacccctgcgcgcgatgcacgcgggcgtggag
gccctgcggcccgcccccggagccgagcacgacggcgtcgtccactgcgccctgctgccc
acccacgccgaggagatcgactggctcgccgactccctcgcccacctcgtacgcaccggg
aaagcccccggcgagatcgccgtgctgtgccgcacggcgggcgacttcgccgagatccag
ggcgcgctcgtcgcccgcgacatccccgtcgaggtcgtcggcctctccgggctgctgcac
ctccccgaggtcgccgacctcgtcgccgtctgcgaagtcctccaggaccccggcgccaac
gcctccctggtacgcctgctcaccggaccacgctggcggatcggcccgcgcgacctcgcc
ctcctgggacggcgcgcccgcctcctcgtgtcccacacgcgcgtgggcgccgacgacgac
gccgaccgccggctcgccgccgccgtcgagggggtcgatcccgccgaggtgatatcgctc
gccgacgccctcgacacgttcctggagatgcccgtcgaggccgggagggacgacggactg
cccttctcaccggacgcccgggtgcgcttcgcacggctcgccaccgaactgcgcgacctg
cgccgctcactcgccgaccccctgatggacgtcctgcaccgggtgctcgccgtcaccggc
ctggaggtcgaactctccgcgtccccgcacgccctcgccgcgcgccgccgcgagaccctc
tcgaacttcctcgacgccgcggcgtccttcgccgcgggcgacggcgaggcgaccctgctc
gccttcctcggcttcctgcgcaccgccgcgcagtacgagaagggcctcgacaacgcgctg
cccggcggtgagaacaccgtcaaagtgctcaccgcccacaagtccaagggcctggaatgg
gacgtcgtcgccgtccccggcctcgtcaccggaaccttccccagcacccaggggcgcgag
aaatggacagcccagggcaaggtcctcccgcacgaactgcgcggagacgccgacaccctg
cccgacatcgacacctgggacgccaagggcatcaaggccttccacgaggccatgaaggac
caccagcgcaccgaggagctccgcctcggctacgtgaccttcacccgcccccgctcgctc
ctgctcggctccggccactggtggggcccctcccagaagcgcccgcgcggcccctccgac
ttcctgcacgccctgtacgaccactgcgcggccggacacggggagatcgaggcctgggcc
gacgaaccggcggaggacgaggacaacccggccctgcacgaagcggcggcggaccacgcg
tggccgctcccgctcgacgacacggcactcgcccgccgccgcgcggccgccgagaccgta
ctcgcccacctggagcgggtggcctcccacgaagacccccaccccgccgcccacgacccg
tcctcccacgacgacccggagtggccgcccccgccggacgacgacgagacccccttcgcg
gacgagttcccccccgaagaaaacgacgccctccccgaagacgacggcaccgtcctcgtg
gcggacgacgatctccccgtgggtgacgactccgactgggactcctggacgacccaccgc
ccgacgctcccgcaccaggcgcccgcaccggagacccgaccggcccccgggcccccaggg
acccaggacggccgcccccacccgcaagacgcccccgtccgcctcacccccgaggaaacc
cgcaccctcgcctcctgggaccgcgacctcgacgcactcaccggagagctccagcgcgcc
cgcgcgagcgtcaccgacgtccccctgcccgcctcgctcaccgcctcacaggtactgcac
ctggccgccgaccccgacggcttcgcacaggaactcgcgcgccccatgccgcgcccccca
caacccgccgcccgccgcggaacccgcttccacgcctgggtggagtcccgcttcgaggaa
ctgcggctgcccatgctcgaaccggaggacctgcccggcagcgacgccgagatcgccgac
gaacgcgacctggaggacctcaaggacgccttcgaacgcacgccctacgcacaccgcacg
ccccaccgtgtcgagacccccttccagctcaccatcgccggacgcgtcgtccggggccgc
atcgacgccgtctacaaggaggacgacggcgacggcaccacgtacgagatcgtcgactgg
aagaccagccgcacccgcaccgccgaccccctccagctcgccgtctaccgcctcgcctgg
gccgagcagcagggcgtccccccggaggccgtcaaggccacgttcgtatacatccgcagc
ggcgagatcgtccgcccccgcaacctccccgaccgagccgccctggaacggctgctcacc
caggacacacgggacccgcgacaggagccggccgaagaaccgccggaccgacacacctcc
gcgggcggctag
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