Streptococcus agalactiae GD201008-001 (serotype Ia): A964_0918
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Entry
A964_0918 CDS
T02248
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sgc
Streptococcus agalactiae GD201008-001 (serotype Ia)
Pathway
sgc03030
DNA replication
sgc03430
Mismatch repair
sgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A964_0918 (dnaE)
03430 Mismatch repair
A964_0918 (dnaE)
03440 Homologous recombination
A964_0918 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgc03032
]
A964_0918 (dnaE)
03400 DNA repair and recombination proteins [BR:
sgc03400
]
A964_0918 (dnaE)
Enzymes [BR:
sgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A964_0918 (dnaE)
DNA replication proteins [BR:
sgc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A964_0918 (dnaE)
DNA repair and recombination proteins [BR:
sgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A964_0918 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1PC
Motif
Other DBs
NCBI-ProteinID:
AFS45688
LinkDB
All DBs
Position
957526..960630
Genome browser
AA seq
1034 aa
AA seq
DB search
MFAQLDTRTVYSFMDSLVDLKTYVSKSKSLGYQTIGILDHSNLYAAYHFIQEAQKANLRP
IVGFSFDIVVENRSIEVYCIAINTVGYKNLLKLSTAQMSEKMSLNLLTEHLEGVQLILPY
QDVLDQLNLPFDYVIGVNLTSPQIPYTKPIIAIDTVRYFQKNDIETLQMLHAIRDNVLLK
DAQYASKNQELKPCQEMTLAFKERFPEALANLESLVENVAYHFDSDFKLPIFNREIPAGE
ELRTLTQNNLKSKGLWSDAYQERLEKELTIIHKMGFDDYFLIVWDLLRFGRSKGYYMGMG
RGSAAGSLVSYALNITGIDPVKHNLIFERFLNEERYSMPDIDIDLPDIYRGEFLRYVRNR
YGSMHSAQIVTFSTFGAKQAIRDVFKRFGASEYELTNITKKIHFRDNLTSVYNRNLAFRQ
IIDSKIEYQKAYDIAKRIEGNPRQTSIHAAGVVMSDDLLTDHIPLKNGEDMMITQYDASS
VEDNGLLKMDFLGLRNLTFVQKMKEKVDKDYGISIQLETIDLEDKETLKLFAAGQTKGIF
QFEQSGAINLLRRIRPECFEDVVATTSLNRPGASDYTENFINRRFGKEKIDLVDPVIAPI
LQPTYGIMLYQEQVMQIAQTYAGFTLGKSDLLRRAMSKKNSKEMQKMSQSFLEGAVSKGH
RQEDARLIFERMAKFAGYGFNRSHAFAYSALAFQLAYFKAHYSDVFYDIMINYSNSDYLI
DAIDFGFVIEKPSINTISYRDRIYKKKIYLGLKNIKGVPNDLAYWISKNQPFQSIEDFLM
RLPQQFQKSGFISPLIAIGAFDEFDNNRRKITSNLDSLFTFVNELGSLFADTSYHWLEVE
DFSNSEKYEMEQDILGVGISPHPLVGISQKASRPFIPISQVQENSEATILVQLKQVKVIR
TKSSGQQMAFLTVMDINSKMDITVFPETFNIVRDDLQEGKYYYLHGKIQKRDERLQMVLN
GVQEATEERFWILLKNHDNDKKISEILSKYKGHIPVYLHYETTKETIQSKVHLVRKDSGL
ALDLSEFVVKTVYQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaacttgatacaagaaccgtttattcttttatggatagcttggttgattta
aagacatatgtctctaaatcgaaatcattaggatatcaaactattggtatcttggaccac
agtaatctttatgcagcatatcattttattcaagaggcgcaaaaggcaaacctaagacca
atagttggatttagctttgatatagtggttgaaaatagatcaatagaagtttactgtatt
gcgataaatacagttggttataagaatctcttgaagttgtcaacggctcaaatgtctgag
aagatgtctctaaatttattgacagaacatcttgaaggggtgcaattgattcttccctat
caagatgttcttgatcagctcaatttaccctttgattatgttattggtgttaatttgacc
tctccgcagattccatataccaaacccattatagccatagatactgttcgatattttcaa
aaaaatgatattgagacattacagatgcttcatgctataagagataatgtcctgttaaaa
gacgcacaatatgcgagcaaaaatcaagaattaaaaccttgtcaagaaatgactctagca
ttcaaggaacgttttcctgaagctttagctaacctagaatctttggtagagaatgttgct
tatcactttgattctgactttaagttacctatttttaatagagaaattcctgctggagaa
gaattaagaaccttaactcaaaataacttaaaaagtaaaggtttatggagcgatgcttat
caagagcgtctcgaaaaagaattaacaatcattcacaaaatgggctttgatgactatttc
cttattgtgtgggatttattaagatttggtcgtagtaagggctactatatgggaatggga
cgtggttcagcagcgggaagtttagtctcatatgctttaaatattaccggtatcgatcct
gtcaaacataatttaatttttgaacgttttttaaatgaagagcgttattcgatgccagat
attgatattgatcttccggatatttatcgtggagaattcttgcgctatgtacgtaatcga
tatggttcaatgcattctgcacagattgtaaccttctcaacttttggtgcgaaacaggct
attcgagatgtttttaaacgctttggtgcatcagagtatgagttaacaaacataactaaa
aaaattcatttcagagataatttgaccagtgtttataaccgcaacttagctttcagacaa
ataatagatagtaaaattgaataccaaaaagcctatgatattgctaagcgtattgaagga
aatcctagacagacttctattcatgccgctggggtagtaatgagtgacgatttgttaaca
gatcatattcctttaaaaaacggtgaggatatgatgataacgcaatatgatgctagttct
gttgaggataatggtcttctaaaaatggactttctaggtcttcgaaatttgacatttgtt
cagaaaatgaaggagaaagtcgataaggactacggtatctctatacaattagaaactatt
gatttagaagataaagagactctaaaactatttgcagctggtcaaacaaaggggattttt
caatttgagcaaagtggagctattaatttgttgcgacgtattaggccagagtgttttgaa
gatgtggtagctaccaccagcttgaataggcctggtgcaagtgattatactgagaatttt
ataaaccgtcgttttggtaaagaaaaaatcgatttagtagatcctgtcatagctccaatt
ttacaacctacctatggcataatgctctatcaagaacaggttatgcagattgcccagacc
tacgcaggttttacgctaggcaagtctgatttgctcagacgtgctatgtctaagaaaaat
tctaaggagatgcaaaagatgtctcaatccttcttagagggtgcagtatctaagggacat
cgtcaagaagatgctcgacttatatttgaacgcatggctaaatttgcaggttatgggttt
aatcgcagccatgcgtttgcttattcggctttagcttttcaattagcctatttcaaagcc
cattattccgatgtcttttatgacatcatgataaattattcaaatagtgattatctaatc
gatgctattgattttggttttgttattgaaaaaccttcaattaatactatttcatacaga
gaccgcatctataaaaagaaaatttatttaggtttaaaaaatattaagggtgttcctaac
gatttggcttattggatttctaaaaatcaaccgtttcagagtattgaagattttctaatg
aggctgccacagcagtttcaaaaaagtggttttatttctccgctaattgctattggagca
tttgacgaatttgataataatagacggaaaatcacctctaatcttgattctttatttaca
tttgtaaatgaactaggtagtttatttgcagatacctcatatcattggctagaagtagaa
gatttctctaattctgagaaatatgaaatggaacaagatatcttaggagtaggaatcagc
ccgcaccctttagtggggatttcacaaaaagctagccgtccgtttataccaattagtcaa
gttcaagaaaatagcgaagctactattttagttcagctaaagcaggtcaaagttattagg
acaaaaagttctgggcaacaaatggctttcttgactgttatggatattaattcaaaaatg
gatattactgtttttcctgaaactttcaatattgtaagagatgatttacaagaagggaaa
tattattacttgcatggaaaaattcagaagcgagatgagcgattacagatggttttaaac
ggtgttcaagaagcaacggaggaacgtttttggatacttctaaaaaatcatgataacgac
aaaaaaatatcggaaatattgtccaaatacaaagggcatattcctgtctatttgcattat
gaaacaactaaagaaactatccaaagcaaagtacatttggttagaaaagatagtggctta
gcccttgatttatctgaatttgttgtgaaaacggtttatcaataa
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