Sinocyclocheilus grahami (golden-line barbel): 107556420
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Entry
107556420 CDS
T04918
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04270
Vascular smooth muscle contraction
sgh04625
C-type lectin receptor signaling pathway
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107556420
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107556420
09153 Circulatory system
04270 Vascular smooth muscle contraction
107556420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107556420
Membrane trafficking [BR:
sgh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107556420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
COG2
APAF1_C
Motif
Other DBs
NCBI-GeneID:
107556420
NCBI-ProteinID:
XP_016095022
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSSTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVPSSHEFDPTGLVQRCVIIQK
DESGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLPQIPLSDGEGEEGPLFSLTSPHSPGSIGPERSSSSPSPSERKPTPL
PVWAMTEEHSRNPTTKLLKEIQDDKKHIPQHQEQLSKPTGTGQDGSLSPRPREGEQEDGG
GDLDRPPSWQGDAGMVPPWTNNTTTPVTPSPVPESPCQRETPCHSPKTTPRDSLNSCPSP
DAEDTPDLDSQSSVGSPSSRPVAHIIGAEDEDFDTEQEQMNGQCSCFQSIDLLKSRPAHL
AAFIHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTFFIDKTASLKVTVPESIIAD
LERTAHSINAERKRPEPISEDIHRQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAEL
ARLDTERMRDRVALEKERSCAEHIMSKIEDGVPQGSVLERTAHSINAERKRPEPISEDIH
RQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAELARLDTERMRDRVALEKERSCAEH
IMSKIEDVLHPSHFSDTIAELCMTFINICVTVERTAHSINAERKRPEPISEDIHRQYVQQ
LQDTLLPDIQKNLEDFRHKRSMGLTLAEAELARLDTERMRDRVALEKERSCAEHIMSKIE
DVLCPKISKALEPRQRPTKPQLPLSAGEQADGSSPPVRGSQSSEGSDGTTALVTLPPYSI
PAAQGTDGISRESETGGTPSSALPRLGDGVIPGDSQDSSSSNTHFDFSPCTLEHLQEEEA
ETEKTQDTGTPRSDKSRMEPLGSGEVQSEDDQCVEVELEPPNWQTLVSRDVLSTLTPQEI
KRQEVINELFYTERAHVRMMKVLENVFYQPLIREAILPPADIKNIFSNLEEIVQLHVSLT
EQMTAVRKKNETALIDSIGDDLLSWFSEEEETKIKRAAGTYCSNQPFALELIKSKQKKDQ
RFNSFIQEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENIAKYTEDPEERSKVKQAGEC
CRNILTHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTKRKMVHEGPL
SWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVM
VRSVATDNRSFFVLSMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLQNIIPLPQ
TDGEREAVELMNSGVQKLNKDSEPISLVSIQSPEKDGTEVMPTPPCSTNPFETKSDEEKD
EEEENSLQDQAEDEEAFVVADTTDRLTFLKQRSRLGIAIDEDEAFELQPLRADEALRTLA
TLRQLLINHMSSQEDTDRDSERREQQEDAARTGSQQGSEDSTAISSTVENGSERGENRGE
NAQELPSGDTGFFETSEDCVSAGSYMVLEVYGGSGESSTDDDVQGSSGEPVAGGDSGIDL
KKLLSSSSQSSGGPNLNRRIMTHIRLLQANLQHLKDTEIKYNQLRQGLSEETATDTEENK
DKSLMSVY
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggaccatcccccagacaaaaagcccaaaagcgacaaggcgtcagtc
ccctcctcgcatgagtttgaccccacagggcttgtgcagcgttgtgttatcatccagaaa
gatgagagtggctttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgta
aaagaggatggagctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtc
aatgggacattagttacacactcaaatcatgtagaagttgtaaagctaataaaatcgggc
tcctacgtggccctaacagtgctggggagaccgccgggtttgcctcagatccccctctca
gacggcgagggggaggaggggcctctcttctcgctcacctcccctcactccccggggtcc
atcggtccagagcgctcatcttcctcccccagcccctcggagcgcaaaccgacccctctg
cctgtatgggccatgacggaggagcacagcaggaaccctacaactaaactactgaaggaa
atccaggacgacaagaagcacattccacagcaccaggagcagctcagcaagcccactggg
actggacaggatggctccttatctccaaggccacgagaaggagagcaggaggatggaggg
ggagatttggatcggcccccttcctggcagggcgatgctggaatggtgccaccatggacc
aacaataccacaacccctgtcactcccagtcctgtcccagagagcccatgccaaagagag
accccctgccacagcccaaagaccacacccagagacagcctcaactcctgtccttcacca
gacgctgaagacacacctgaccttgattctcagtcgagtgtggggagcccctcctctcgt
ccggtagcacacatcattggtgctgaggatgaagactttgacacagagcaggaacagatg
aatggccagtgtagctgttttcagagcatagacctcctgaaatctcggcctgctcacctg
gcagctttcatccatcacgttgtctctcagtttgaccctgcgccacttctgtgctacctc
tatgctgaactttacaaacagaccagctccaaagagacacggcgaatcctcatggatacc
ttcttcatagacaaaacagctagcttgaaagtaacagtgcccgaatccatcatcgctgac
ctggaacggactgcacactcaattaatgcagaaaggaagaggccggagcccatctcggag
gacatccaccgacagtatgtgcagcagctgcaggacacacttctacctgacatccagaag
aacctagaagatttcaggcacaagcgcagtatgggtttgaccctggctgaagcggagcta
gcccgtctggatacagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgt
gcagagcacatcatgtctaagatagaagatggtgtcccacagggctctgttcttgaacgg
actgcacactcaattaatgcagaaaggaagaggccggagcccatctcggaggacatccac
cgacagtatgtgcagcagctgcaggacacacttctacctgacatccagaagaacctagaa
gatttcaggcacaagcgcagtatgggtttgacactggctgaagcggagctagcccgtctg
gatacagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgtgcagagcac
atcatgtctaagatagaagatgtactacacccatctcattttagtgacactatagcggaa
ctttgcatgacttttataaatatttgtgtgaccgtagaacggactgcacactcaattaat
gcagaacggaagaggccggagcccatctcggaggacatccaccgacagtatgtgcagcag
ctgcaagacacacttctacctgacatccagaagaacctagaagacttcaggcacaagcgc
agtatgggtttgaccctggctgaagcggagctagcccgtctggatacagagagaatgaga
gaccgtgtggctctggaaaaagagcgatcctgtgcagagcacatcatgtctaagatagaa
gatgtactctgtcccaagatcagcaaggctctggaaccgaggcagcgtccgacaaagcct
cagctaccattgagcgctggagaacaggcagacgggtcgtctcctcccgtacggggcagt
cagtccagtgagggctcagatggcaccactgccctggtcacgttacccccttacagcatt
ccagcagcacagggcacagacggtatcagccgagagtccgagactggtggaactccttct
tctgcacttcccagactgggagacggtgtcatcccgggagattcgcaggactcgtcctct
tcaaatactcactttgacttcagcccctgtacactggagcatctacaggaggaggaagct
gagacagaaaagacgcaggacaccggcacccccaggtctgacaagagcaggatggagccg
ctgggctctggagaggtgcagagtgaagatgatcagtgtgttgaggtggagctagagcct
cctaactggcagacgctggtgagcagagacgtcctgtccacacttacccctcaggaaatc
aagagacaggaagtcatcaacgagttgttctacacagagagagcacacgttcgaatgatg
aaggttctggaaaatgtgttttaccagccgctgatcagagaggccatcctgcctcctgca
gacatcaaaaacatcttcagcaaccttgaggagatcgttcagctgcacgtgtctttaacg
gaacaaatgactgcagtccggaagaaaaatgagactgcgctcattgactcaataggagat
gatctgctttcctggttcagtgaggaagaggagacaaagatcaagagagctgcaggcacg
tactgcagtaatcagcctttcgccctggaactcattaagagcaaacaaaagaaagaccag
cgcttcaactccttcatacaggaggcagagagtaaccgtcattgtcgcaggctgcagctg
aaggacattattcctgtggagactcaaagactcacaaagtatcccctcctgctggagaac
atcgccaaatacacagaggatcctgaggagagaagtaaagtgaaacaggctggcgaatgc
tgtcgaaatattctcactcacgtcaaccaggaggtgaaggaggccgagaacaaacagagg
ttggaggactaccagagacgactggatctgtcctcattgaaacagagtgagaaccccatg
atcgccgagtttaagaacctggacttgactaagaggaagatggtgcatgagggaccgctg
tcttggaaggtcaacaaagataaaactattgagctgtacacattgctgctggaggatata
ttggtgctacttcaaaggcaagatgagaagctaatcttaaaatgccacagtaagaatctg
gcgggcaccgctgagaccaaacacatcttcagccccatcatcaaactcagcaccgtgatg
gtgcgctccgtcgccaccgacaacaggtcattctttgttctctctatgtctgataatgga
gcccagatctatgaactaatggcccagaccgtatctgagcaaaagacgtggcagtgtctg
ataacacaaagagcagactgcatgaagaccaaactacagaacatcattccattacctcag
actgatggggaacgtgaagcggtcgagttgatgaactctggtgttcagaaactaaacaaa
gactctgagcccatttctttagtgagcattcagtctccagaaaaagatggcactgaggtc
atgccaaccccgccatgtagcaccaacccattcgagaccaaatctgatgaggagaaggat
gaagaagaagaaaattcactacaggatcaagctgaggatgaggaagcgttcgtggtggcc
gatacgaccgatcgactgacattcctgaagcagcgctcgaggctgggcatcgccatagac
gaggacgaggcctttgagctccagccactcagagccgatgaagctctcagaacactggca
acactgaggcagctcctgatcaaccacatgtccagtcaggaggacacagacagagatagc
gaaagacgagagcaacaggaagatgcagcgaggacgggctctcagcaggggtcagaggac
agcactgcgatcagctccactgttgagaacggctcagagaggggcgagaacagaggggag
aacgcacaggaactgccctccggagacacaggcttctttgagacgtctgaggattgtgtc
tcagcaggcagttacatggttttggaggtgtatggcggctcaggcgagagcagcacagat
gatgacgtgcagggcagcagcggggagccagtggctgggggagactcaggcattgacttg
aagaagctcctctcttcctcctctcagagcagcggaggaccaaacctcaacagacggatc
atgacacacatacgtctactacaggccaacctgcagcatctgaaggatacagaaatcaag
tataatcagctacgccaagggctatcagaggaaacagctactgacacagaggaaaacaaa
gataaaagtttaatgtctgtttattga
DBGET
integrated database retrieval system
