Sinocyclocheilus grahami (golden-line barbel): 107563452
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Entry
107563452 CDS
T04918
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320
PPAR signaling pathway
sgh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107563452
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
107563452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107563452
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107563452
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107563452
Nuclear receptors [BR:
sgh03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
107563452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
107563452
NCBI-ProteinID:
XP_016103823
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSTLSTTDITDVSHGDSLCCASEEGPSAATAEVKQETLSQTASYGTSHNELNDTLLMEPS
DIKMYPTEDTPAREGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRR
SVIKGAQYSCKNLGRCEMDMYMRRKCQQCRLRKCREAGMLEQSLSSLIGVLSEEQIRLKK
MKKQEESTSAVAAPSPVPEMPPLAPEQQEMIEKLVAMQKQCNKRSFLDRPKVTPWPLSQD
PLNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETS
RRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYALLIAIN
IFSADRPNVQDHELVERLQQPYVDALHSYIRIKRPNVSMIHLRGQT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctttctacgactgatatcactgatgttagtcatggggactctctgtgctgt
gccagcgaagagggcccttcagcagcgacagcagaagtgaaacaggagactctaagtcag
acggcctcatacggcacctcacacaatgagctgaacgacacgctgctcatggagcccagc
gacatcaagatgtaccccacagaggacacacctgcacgagagggtcagccagtcaagaga
aagaaaggccctgctcccaagatgttggggaatgaggtgtgtagcgtatgtggagacaaa
gcatctggctttcattacaatgtgctgagctgtgagggctgtaaaggtttcttcagacgc
agcgtcatcaaaggagcacaatacagctgcaaaaatttgggccgctgcgagatggacatg
tacatgcgccgcaagtgtcagcagtgccgtctgcgcaagtgcagggaggcaggcatgctg
gagcaatctttatcgtctcttataggtgtgctgtcagaagagcagatccgactaaaaaag
atgaaaaaacaggaagagagtacctctgcagtggcagcacccagccctgttcctgagatg
ccccctctggctcctgaacagcaggagatgatcgaaaaactggtggccatgcagaaacag
tgcaacaaacgctcttttctcgaccggcccaaagtcactccttggccactgagtcaggac
ccacttaaccgagaggttcgacagcaacggtttgctcatttcactgagctggccatcatg
tctgtgcaggagattgtagactttgctaaacagctgcctggcttcctggagctcacccga
gaggaccagatcgccctgctgaagacctcaactatagagatcatgctgctagagacttcc
agacgttataacccagcgatagagagcatcacttttctcaaagacttcagttataataag
gaagattttgccaaagcagggctgcagttggagttcatcaaccccatctttgagttttca
aaaggcatgaatgacctccacctggatgaggcagagtacgctttgctcatcgctattaac
attttctcagcagaccgaccgaacgtgcaggatcacgagttagtggaaagactacagcag
ccatatgtggacgcgctccactcttacatccgaataaaacgacccaacgtaagtatgatt
caccttagaggccaaacataa
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