Sinocyclocheilus grahami (golden-line barbel): 107566635
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Entry
107566635 CDS
T04918
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320
PPAR signaling pathway
sgh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107566635
03320 PPAR signaling pathway
107566635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107566635
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107566635
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107566635
Nuclear receptors [BR:
sgh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107566635
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
107566635
NCBI-ProteinID:
XP_016107610
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All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPITSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQMNMFARNTEINSTVSMSGLHAVSSSDDVKPPFGLKPMS
AHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDSKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSPANEEMPVEK
ILEAEMAVEQKTELHTDGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDD
QVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEA
YCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattctcgtagtccagacagttcatccgtttcctcaccaccatca
ggtcagcgttcgccaccgttggccccttcagccgccgccatgacttccctgccacccatc
acttcggctgtgaacagtcccatcagcagcatgggctcacccttctccgtcatcagctcc
tctctgggttctccttgccttcctggaactccctcagtaggctacggccccatcagcagc
ccacagatgaacatgtttgccagaaacacagagatcaactccaccgtgtccatgtcgggt
ctgcacgcagtcagcagctctgatgatgtcaaaccgcccttcggtttgaagccgatgtcc
gcccacagcccagggcctatggtctctcagaaacgcttgtgtgccatctgtggggatcgc
tcctctggcaagcactacggcgtgtacagctgtgaggggtgcaagggctttttcaagcgc
actgtgaggaaggacttgagctacacatgcagagacagtaaggactgtctggtggacaaa
cgtcagaggaaccgctgccagtactgccgctaccagaagtgcctggccatggggatgaag
agagaggtggtccaagatgaacgacaacgatcagttcaggaggagcgtcagaggaacaag
gagcgtgaaggagaggttgagtccaccagccccgcgaatgaagagatgcctgtagagaag
attctagaagcagagatggccgtggagcagaagaccgagctgcatacagatggcagctca
gggggaagctctccgaacgacccagtcacaaatatctgccaggcggctgataaacagctg
ttcactttggtggagtgggcaaaacggatccctcacttcagtgagctgtctctggatgac
caggtcatcctgctgcgtgctggctggaatgagctactgatcgcgtcattctctcatcgc
tccatcacggtgaaggatggcattctgctggccaccggcctccacgtgcacaggaacagt
gctcacagcgcaggggtgggagccatctttgacagggagagtgcgcacaatgcagaggtt
ggggccatattcgacagggtgttgacggagctggtgagcaagatgagggacatgcagatg
gataaaacagagttgggctgcctgagagccatcatcctcttcaacccagatgcaaaggga
ttgtcaagcccaagtgaagtggagttactgagagagaaggtctatgcatcgctggaggct
tattgtaaacagagatatcctgaccagcagggcaggtttgccaagctcctcctccggctg
ccagcgctgcgctctattggccttaagtgcctggagcacctgttcttcttcaagctgatt
ggagacaccccaatcgacaccttcttaatggaaatgcttgaagcgccacatcagctgacc
taa
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