Sinocyclocheilus grahami (golden-line barbel): 107581696
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Entry
107581696 CDS
T04918
Name
(RefSeq) collagen alpha-1(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107581696
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107581696
09142 Cell motility
04820 Cytoskeleton in muscle cells
107581696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107581696
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107581696
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107581696
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107581696
Hyaluronan
Extracellular matrix or blood plasma proteins
107581696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
107581696
NCBI-ProteinID:
XP_016122808
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MALNGYILTALCALWGGIIAQDVQLTSFRECPVDLFFVLDTSESVALRAKPPEFYINQIK
TFTKLFIDQLINLPQPCDRNVTWNSGALHYSDDTELVMGLVDLNTRRFDLKAAIDKIKYI
GKGTYTDCAIKEGISELLRTGSHYHENKYIVVVTDGHPVTGYKEPCGGIQEAANEARQHA
IKVFAVAISPDQEDTRLSVIATDVNYRQNFTAADNSRSSQMSTISTIIDLINKKNAGFKA
AIDKIKYIGKGTYTDCAIKEGISELLRTGSHYHENKYIVVVTDGHPVTGYKEPCGGIQEA
ANEARQHAIKVFAVAISPDQEDTRLSVIATDVNYRQNFTAADNSRSSQMSTISTIIDLIV
SVVTQTHHSNDVCVVFLWIYGGSHYHENKYIVVVTDGHPVTGYKEPCGGIQEAANEARQH
AIKVFAVAISPDQEDTRLSVIATDVNYRQNFTAADNSRSSQMSTISTIIDLITNETKDVC
CSFDCNAPGGPLGLPGDPGQRGEAGRPGMPGEKGDVGAPGNVGDPGPIGYQGMKGDQGIR
GDKGERGHKGFKGDKGQHGLDGVDGRKGEAGFSGLPGCKGSPGPDGLQGELGPKGDPGQY
GPKGERGDPGKDGEPGRSGNYGSSGPKGDRGPRGANGDKGERGDDGLQGPDGTRGDGGTS
GEKGEQGSRGNRGPRGEPGEPGPRGEQGREGSAGPNGDPGELGRAGSPGYRGDEGATGPE
GAKGPRGIKGAPGDRGLMGERGEDGPPGNGTVGCHGFQGYPGPRGDQGAPGGKGTPGPKG
DDGEPGDPGSDNNRPGLPGPKGAKGHRGSEGSSGPPGPPGPQGADVSELKSCCECKCGPL
DIAFIVDSSESIGASNFAIAKDFIVTVMDRLKLRQFGANESRIGVVQYSGANAQEVVQLG
DPNIKTLTDLKQAVKDLRWLAEATYTGEALQYSLNNLINKLLTERSVVIVLTDGRSDTKR
DTVPLNVLCGKGLKVGGVGVTDYAERKPNPEQLLEVVCKDDPREGFSFVLNNFGLLLDDS
FLQNLTERICEDKKCPTYTCPISFNDSTDVLIMMDSSASVGSKNFEMTKEFTQMLAKRFL
LAESGGFQVRVGVGQYSNNANLEAEFSSDTTQVGAQITEAKFQNAGTQVTNALNFAIERF
RGGRTRKKKLLVFSDGRSQGVNNIQIEKSMEQVSNAGIELYVLAVGNQVNEVHLRTLVSR
GRPYDNIYANRHLFKVPDYRSLVTGVFYQTVSRKISLESRG
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttaatggatatatattgaccgctctgtgcgcactttggggagggatcatcgct
caggatgtccaactaacctcattcagagagtgtcctgtggacttgttctttgtgttggac
acgtctgaaagtgtggccctcagagccaaacctccagagttttacatcaaccagatcaag
accttcacaaagctgttcattgatcagctaataaacctaccacagccatgtgatcgcaat
gtgacgtggaattctggagctctgcattacagtgacgacactgagctggtgatgggacta
gttgacctgaacacaaggcgtttcgacctaaaggcggccatagacaaaatcaaatacatt
ggaaaaggaacatacaccgactgtgccatcaaggagggtatctctgagctgctccggacg
ggctcccattatcatgagaataagtacatagtggtggtcacggatggtcaccctgtgacc
ggctacaaggagccatgtggtgggatccaagaggctgccaatgaggcacgacaacatgct
atcaaagtgttcgctgtggccatctcacctgaccaggaggacaccagactctctgtcatt
gccacagatgtgaactacagacagaacttcaccgctgcagacaactcccgctcctcgcaa
atgagcactataagcaccatcatcgacctgatcaataaaaaaaatgctggtttcaaggcg
gccatagacaaaatcaaatacattggaaaaggaacatacaccgactgtgccatcaaggag
ggtatctctgagctgctccggacgggctcccattatcatgagaataagtacatagtggtg
gtcacggatggtcaccctgtgaccggctacaaggagccatgtggtgggatccaagaggct
gccaatgaggcacgacaacatgctatcaaagtgttcgctgtggccatctcacctgaccag
gaggacaccagactctctgtcattgccacagatgtgaactacagacagaacttcaccgct
gcagacaactcccgctcctcgcaaatgagcactataagcaccatcatcgacctgatcgtg
agtgtcgtaacacaaactcaccacagcaatgatgtttgtgtggttttcctgtggatttat
gggggctcccattatcatgagaataagtacatagtggtggtcacggatggtcaccctgtg
accggctacaaggagccatgtggtgggatccaagaggctgccaatgaggcacgacaacat
gctatcaaagtgttcgctgtggccatctcacctgaccaggaggacaccagactctctgtc
attgccacagatgtgaactacagacagaacttcaccgctgcagacaactcccgctcctcg
caaatgagcactataagcaccatcatcgacctgatcacaaacgaaacaaaggatgtgtgc
tgctcctttgactgcaacgctcctggaggccctctgggactccccggtgatccaggacaa
agaggagaggctggaagaccaggcatgccaggagagaaaggagatgttggtgctccggga
aatgttggtgatcccggtcctatcggttaccaaggaatgaagggagaccaaggaataaga
ggcgataagggagagagaggtcataaaggcttcaagggagacaaaggtcaacatggtctt
gatggtgttgatggacgtaagggtgaggcgggattcagtggccttccaggctgcaaaggg
tcaccggggccagatggcttgcaaggagaactaggtcctaaaggagaccccggccaatat
ggacccaaaggagaaagaggagatcctggcaaagacggtgagccaggaagatctggaaac
tatgggtcttcagggccgaagggagacaggggtcctcgtggagccaatggcgataaaggc
gagcgaggagatgacggactacaaggaccagatggcacaagaggagacggaggcacatct
ggtgagaaaggtgaacaaggttcccgtggtaacagagggcccagaggcgaacctggtgaa
cctgggccccggggtgaacaaggacgtgaggggtcagcaggaccaaacggagatccgggt
gagctaggaagggcggggtccccaggttaccgtggtgatgaaggtgctactgggccagag
ggagctaaagggcccagaggaatcaaaggggccccaggagacagaggcctgatgggagag
aggggtgaagatggaccaccaggaaatggaacagtgggctgccatggttttcagggttat
cctgggcccaggggagatcaaggagcacctggtggaaaaggaacccctggacccaaggga
gatgatggagagccaggtgaccctggatcagataataacagaccaggactacctgggcct
aaaggagccaaaggtcacagaggatctgaaggaagttctggaccaccaggaccacctggg
ccgcaaggagctgatgtgagtgagttaaaatcttgctgtgaatgcaaatgtggacccctg
gacattgccttcattgtggacagctctgagagtattggagcttctaactttgccatcgct
aaagacttcattgtgacggtaatggacaggctcaagttaagacagtttggtgccaatgag
tctcgtattggcgtggtgcagtacagcggtgccaatgctcaggaggtcgtacagcttggt
gaccccaacattaagaccttgacagacctaaaacaagctgtgaaagacttgcgctggctg
gctgaagccacatacactggagaagctctgcagtactcactaaacaacctgattaacaag
cttttgacggagaggagtgtggtcattgtccttactgatggacgctctgacaccaaaaga
gacactgtgcccctaaacgtgctgtgcggcaagggactgaaggttggtggcgttggagtg
acggattatgcagaaaggaagcccaatccagaacagcttctggaggttgtgtgtaaagat
gatcccagagaaggcttctcctttgtcttaaacaactttggtcttcttctggatgacagt
ttcctgcaaaacctgactgagaggatctgtgaagacaagaagtgtcccacctatacttgt
ccaatttcatttaatgacagcaccgatgtcctcatcatgatggacagctcggcaagcgtg
ggctccaagaatttcgagatgaccaaggagttcacacaaatgctggctaagcgctttttg
ttagcagaaagtggaggcttccaggtccgggttggcgttggccagtacagcaacaatgcc
aacttggaggccgaattttcctcagacaccacccaggtgggcgctcaaatcacagaggca
aagttccagaatgcaggtacacaggtaacaaacgctctcaacttcgccattgagcgcttc
aggggcggcaggacgaggaagaagaagctgctggtgttttcggatggtcgttcccaaggc
gtcaataacatccagattgaaaaatccatggagcaggtgagcaacgcaggcattgagctg
tacgtgctggccgtgggcaaccaggtaaacgaggtgcacctgcgcaccttggtgagccga
ggacggccctatgataatatatacgccaaccgccaccttttcaaagtacccgactaccgc
tcattggtcactggggtcttttaccaaactgtatcccgcaagatttccttggagtcaaga
gggtga
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integrated database retrieval system
