Sinocyclocheilus grahami (golden-line barbel): 107584872
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Entry
107584872 CDS
T04918
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgh01009
]
107584872
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107584872
04131 Membrane trafficking [BR:
sgh04131
]
107584872
03036 Chromosome and associated proteins [BR:
sgh03036
]
107584872
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107584872
Protein phosphatases and associated proteins [BR:
sgh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107584872
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107584872
Membrane trafficking [BR:
sgh04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107584872
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107584872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
107584872
NCBI-ProteinID:
XP_016127120
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MDPVPESKGSTRSPRGTSETKSENNPNQKKNLQEARRKGRMDRSKEEEEMSNELKNLDVR
GKTKATGTGLVYVDAFTRFHCLWDASHPECPARVSAVMEMLETEGLLGRCVQVEARAVSE
DELLLVHTKAYVELMKSTQKMTEEELKTLAHKYDSVYLHPEFFASACLAVGSVLQLVDKV
MTSQLRNGFSINRPPGHHAHADKMNGYCMFNNLAIAARYAQKQHGVKRVLIVDWDVHHGQ
GIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKIGMEDGD
YITAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMRVSPKCFSILTHMLKGVAQGRL
VLALEGGYNLQSTAEGVCASVRSLLGDPCPHLTSPGAPSESALKSISESVSALYPFWKSL
QTFEGGPLSDVTPLPAPVCAEVKVSSPITGLVYDQRMMLHHNMWDGHHPELPQRISRIFC
RHEELGLLSRCLQIPARLATEEELALCHSSEHISTIKSTEHMKPRDLHRLGNDYNSIYIC
NESYTCALMAAGSCFNSVQAIITGHVRNGVAIVRPPGHHAEKDTACGFCFFNTAALTARY
AQSITHESLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPSSEDANYDKVG
QGKGTGYNVNIPWNGGKMGDPEYMAAFHHIVMPIAREFAPELVLVSAGFDAARGDPLGGY
QVTPEGYAHLTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLPPP
KTSATVTINNVLRAHAPFWSSLRIQIPESLRLALPSPKSKGKRASAGKSKKSPRQSTQSP
GQTPQHLEESGLDELSKDLLSLNLNTSTSSNPSPASVPIGGARRKVKPNPQRDSAGRESD
SPLKLKSEKARVGDGTHAEITAVKAETPDRTIPESVVSGKSAAVDDQESSVLEAAGGHTT
MMSVLESVFGAQATDLDTMYVVDPLSWCPHLESVRPVPAGGIDVFLPCEECGGDTENWIC
LFCYKVLCGRYVKQHMVTHGQVSGHPMVLSFADLSVWCYACESYVHNKVLHEAKSAAHLV
KFGEEIPPFS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgttccagaatccaaaggttctactcgatcaccgagaggaacatctgaaacc
aaaagcgaaaacaatccgaaccagaagaagaatctacaggaggcgcggaggaagggcaga
atggatcggagcaaagaggaggaggagatgagcaatgaactcaaaaacttggatgttcgt
ggtaagactaaagcaacaggaacaggtctcgtctacgtagatgcctttactcgctttcac
tgcctctgggatgccagtcacccggagtgtccagcaagagtgagcgctgtgatggagatg
ctggagacggaaggtctgctgggacgctgcgtacaagtagaggccagagctgtgtcagaa
gatgagctgttactcgttcacacgaaggcgtatgtagagctgatgaaatccacacagaaa
atgacagaggaggagctgaaaactttggctcataaatatgattctgtctacctgcatcct
gaatttttcgcctccgcctgtctggcggtgggatcagttctccagctggtggataaagtg
atgacatcacagctgcgtaacggcttctccatcaacaggcctcctggtcaccacgctcat
gcagataagatgaatggctactgtatgtttaataatctggccatagcagcgcgctacgca
cagaagcagcatggagttaaacgagttctgattgtggattgggatgtgcatcacggacag
ggaatccagtatatttttgaagaggatcccagtgtgctgtatttctcagtgcacagatat
gaagacggctcgttctggccgcatctcaaggagtctgacagcagttcggtgggttcagga
gcaggacagggctacaatatcaacctgccctggaacaagatagggatggaggatggagat
tacatcacagctttccagcagctcctgcttccagtggcgtatgagtttcagcctcagctg
gtgttagtggcggccggctttgactctgtgattggtgacccaaagggtgagatgcgagtg
agtccaaagtgtttctccatcctgacccacatgctgaaaggtgtagcacagggtcgactc
gtgctggctcttgagggtggatataacctccagtccacagcagagggtgtttgtgctagt
gtgaggtcactgctgggtgacccttgccctcatctgacctctcctggcgctccgagtgaa
agtgctctgaagtccatctcagagtccgtctcagccttgtatccattttggaagagtctt
cagacttttgagggtggtcctctgtctgatgtcactcccctgcccgctccagtgtgtgca
gaagtgaaggtttcctctccgatcactgggctggtttacgaccagagaatgatgcttcat
cacaacatgtgggatggtcatcatccagagctccctcagagaatttctcgcatcttttgc
cggcatgaggagttgggtctgctgtcccgttgccttcagataccagctcgcctagcaaca
gaagaagagctggcactctgtcacagttctgagcatataagcactataaagagtacagag
cacatgaaacccagagatctgcaccgtctgggaaacgattacaactccatctacatctgt
aatgagagctacacctgcgccctgatggccgctgggtcgtgttttaactctgtacaggcc
ataatcacaggccacgtgagaaatggcgtggccatagtccgtcctcctggtcatcatgca
gagaaagacacagcttgtggtttctgtttctttaatacggctgctttgaccgcacgctat
gcccagagcatcactcacgaatccctgcgtgtcctcatcctggattgggatgttcaccat
ggaaacggcacacagcacatctttgaggaggatgacagtgttctgtacatctccctgcat
cgctacgaagacgggacattcttccccagttcagaggatgctaactatgataaggtgggg
cagggcaagggcacaggatacaatgtcaacatcccctggaatggaggaaagatgggagac
ccagaatacatggcggctttccatcacatagtgatgccgatagccagagagtttgcccca
gagctggtgctggtgtctgctgggtttgatgcagcacgaggtgatccgttaggagggtat
caggtgaccccagagggctacgctcacctcacccatcagttaatgagcctggctgcagga
agagtgctagtcatactggagggaggatataacctcacctccatctctgagtcaatgtcc
atgtgcaccagtatgttgctgggagactctcctccatctctagaccatctgccccctccg
aagaccagtgccactgttaccattaacaatgtcttgcgtgcacatgcccccttttggagc
tccttgagaatacagattccagagtcacttcgtttggctttgccgtctcctaaatcgaaa
ggtaagcgggcatcagcgggcaagagcaagaaatctcctcgccagtccacccagagtcct
ggacagacaccgcagcatcttgaggaatccggccttgatgagctcagtaaagacctgctc
tctctgaatctcaacacaagtacctcatctaaccccagcccagcatctgtccccattgga
ggagccagacggaaggtgaaacccaacccacagagggattcagcaggccgggagtcagat
tcacccctaaaactcaagtcagagaaagccagagttggagatggcacgcatgcagagatt
acagctgtaaaagcagagacacctgaccggacaattccagagtctgtggtctctggaaag
tcagctgccgtggatgatcaggagagttcagtgctggaagctgctggtggtcacaccact
atgatgtcagtcttagaaagtgtctttggagcacaagccacggatttggacactatgtat
gtggtggacccgttgtcttggtgcccacacttggagtcagtgcgaccggttcccgcaggt
ggcatcgatgtcttcctgccgtgtgaagagtgtggaggtgatacagaaaactggatctgc
ctcttctgctacaaggtgctctgcgggcgttatgtgaagcagcacatggtgacccacggg
caggtgtcgggtcaccctatggtgctgagcttcgctgacctttctgtctggtgctacgct
tgtgagtcatacgtccacaacaaggtgctccatgaagccaaaagtgccgctcaccttgtg
aagtttggagaggagattcctcctttcagctga
DBGET
integrated database retrieval system
