Sinocyclocheilus grahami (golden-line barbel): 107601247
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Entry
107601247 CDS
T04918
Name
(RefSeq) thyroid hormone receptor alpha-A isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107601247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107601247
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107601247
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107601247
Nuclear receptors [BR:
sgh03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
107601247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107601247
NCBI-ProteinID:
XP_016148836
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All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MEHKEQELNLPEGDETRWPNGVKRKRKNSQCSMKSTSVNIISVPGYVPSYLEKDEPCVVC
GDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDSCCIIDKITRNQCQLCRFKKCI
SVGMAIDLVLDDSKRVAKRRLIEENRERKKKEEIVKTLHNRPEPTVSEWELIRMVTEAHR
HTNAQGPHWKQKRKFLPEDIGQSPAPTSDNDKVDLEAFSEFTKIITPAITRVVDFAKKLP
MFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVSREQLKNGGLGVVSD
AIFDLGKSLSQFNLDDSEVALLQAVLLMSSDRSGLTCLEKIEKCQEMYLLAFEHYINHRK
HNISHFWPKLLMKVTNLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaagagcaggagcttaacctgccagagggagatgagacacggtggccgaat
ggagtgaagagaaaaagaaagaatagtcaatgctctatgaagagcacgtctgtgaacatc
atctctgttccagggtatgttcccagctacctggagaaagatgagccatgtgtggtatgc
ggggacaaggccaccggctaccattaccgctgcatcacatgtgagggctgcaagggtttc
tttaggaggacaatacagaagaatcttcacccttcctattcctgcaaatatgacagctgt
tgcatcattgataaaatcactcgcaaccagtgccagctgtgccgcttcaagaagtgcatc
tcggtgggcatggccattgacttggtgctggatgattcaaagcgtgtggccaagaggcgt
ctgatcgaggaaaaccgggaacggaaaaagaaagaggagattgtgaaaacactgcacaat
cggcctgagcccaccgtctcggagtgggagctgattcgtatggtgacggaggctcatcgt
cacaccaatgcccagggccctcactggaagcagaaacgcaagttcttaccagaagacatc
gggcagtctccagcccccacatcagacaacgacaaagtggacctggaggccttcagtgag
ttcaccaagatcatcacccctgccatcacacgagttgtggactttgccaaaaagctgccc
atgttctctgagctcccctgtgaagaccagatcatcctgctgaaaggctgctgtatggag
atcatgtcgttgcgcgcagcggtacggtacgacccggagagcgagacgctgaccctgagc
ggggagatggctgtcagtcgagagcagctgaagaacggagggttaggagtggtgtctgat
gccatctttgatttgggcaagagcctgtcacagttcaacctggatgactcagaggtggcg
ctgctgcaggctgtactgctcatgagctcagatcgttccggactcacgtgtttggaaaag
attgagaagtgtcaggagatgtacttgttagcattcgagcactacatcaaccatcgcaag
cacaacatctcacacttctggcccaagctgctgatgaaggtgacgaacctgcgcatgatc
ggcgcctgtcatgccagccgcttcctgcacatgaaagtggagtgtcccacagaactcttc
cccccgctcttcctagaggtcttcgaggatcaggaggtgtga
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