Sphingopyxis granuli: SGRAN_0220
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Entry
SGRAN_0220 CDS
T04372
Name
(GenBank) DNA helicase
Organism
sgi
Sphingopyxis granuli
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Peptidase_M78
PDDEXK_1
AAA_11
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AMG72617
UniProt:
A0AA86GJC3
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Position
235135..238536
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AA seq
1133 aa
AA seq
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MDGVELARQVAAELHARLVASGADPWSPYDFAVAEAKRRGIDVEPTAVGAAVLNGGRATF
VAADDLILHESAGSRFEQAFLVAHEIGHVELGDDPDSEAAPMIDLARAAEPSPVGMDRVV
DYGRRQRREVQMDLFARELLLPRNVARALHVDQGLSASAIAAKLGAPFEVVAQQMFDALL
LPIVPPVTAATHAERPLNPLQAAAAAHRGEAYLLEAGPGTGKTQTLIARVEGLLEEGVDP
RRILLLTFSNKAAGEMAERIARKRPEAAAAMWIGTFHAFGLDIIRRFHAELGLPKDPRMM
DRTEAVELLEEEFPRLRLAHYRNLYDPTQIIAEMLAAVSRAKDEVVNAETYAALADAMLA
KGADSGTREAAERAGEVSRVYAAYEQLKRNAHCVDFGDLVALPVKLLEAEAAIRATLQAQ
YDHVLVDEYQDVNRSSVRLLSALRPDGRNLWMVGDAKQSIYRFRGASSFNMTRFGKEDFP
GGKRGRLKRNYRSVPEIVANFSSFATTMRAGDADSGLEADRNGNGQKPELRTVQRAEQQQ
VALADAIEALRREGHAYRDQAVLCTGNEKLSTIGQDLERLGVPVLFLGSLFERAEVKDLL
ALLSVLVDRRAMGLVRIACWPDFRMSFADVATIFEYLRAADQPSGGWLQHIESIPGVSDA
GRQALVKLAAALSGFDQTASPWTVLATLLLDRTRVAARLGVSEDLADRTRGIAIWQFLNF
LRVQPAGRGLPITRVLDRVRRLVRLGDDRDLRQLPAAAQHLDAVRLMTIHGAKGLEFGGV
HLPGLNSDTIPRTPPAPPCPAPDGMIAGAGGSALEAFRAGQAEEQECLFYVAQSRARDRL
ILYAPTEKSNGHNRPLSPFLDRLGATLTRGSVVPARPLPMAAEAHGIELIVDGRLQFGAP
QIALYESCPRRFFYTHVLQVGGRRTATAFMHLHEAVRVMVEGVIASDSPVTERDLEDRTD
VALAGQGLGDHGYRAEFRDLALAMLRFLLANRADAVAEAPVALSLNFGGEEIIVRPDEVL
VRPDGVRTVRRIRTGHRRSAESKDVGAAALMLAVQQAFPGAVAELVHLSDGETHALALSD
RELKGRKDKLAKFLGDIRAGRFPAEVSSRTCPNCPAFFICGQTPDGPLRKKFA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtggagctcgccaggcaggtcgccgccgagcttcatgctcgtctcgtcgcc
tcgggtgccgatccttggtcgccctatgactttgctgtcgccgaagccaagcggcgtggg
atcgatgtcgaaccgacggccgtcggcgcggccgtcctcaacggcggccgcgcgaccttc
gtcgccgccgacgatctgatccttcacgagagtgcggggtctcgcttcgagcaggccttc
ctcgtggcgcacgagatcggacatgtcgagctcggcgacgatcccgatagcgaggcggcg
ccaatgatcgatctggcccgcgcggccgagccatcgccggttggcatggatcgggtggtc
gattacggacgccggcagcgtcgcgaggtccagatggacctgttcgcgcgcgagctcttg
cttccccgcaacgtcgcgcgagcgctgcatgtcgaccaagggttatccgcctcggcgatc
gccgcgaagctcggcgcgccgttcgaggttgtcgcccagcagatgtttgacgccctgctc
ctcccaatcgtgccgcccgtcacggccgcgacgcatgcagagcggccgctcaacccactc
caagccgcggccgcggcgcaccgcggcgaagcctatctgctcgaggcgggccccggcacc
ggcaagacgcagacgctgatcgcgcgtgtcgaaggccttctggaggagggtgtcgacccg
cggcgcatcctgctgttgactttctcgaacaaggcggcgggtgagatggctgagcggatt
gcgcgcaagcggcccgaggccgcggctgcaatgtggatcggcaccttccacgccttcggc
ctcgacattatccgtcgtttccatgcggagctcggcttgccgaaagacccgcggatgatg
gatcgaaccgaggccgtcgagctcctcgaggaggagttcccgcgcctgaggctcgcccac
taccgtaatctctacgatccgactcagatcatcgccgagatgctggccgccgtctcgcgg
gcgaaggacgaggtggtcaacgccgaaacctacgcagcgcttgccgacgccatgcttgcc
aagggggcggactccggtacacgcgaggccgccgaacgtgccggagaggtgtcccgcgtc
tatgccgcctatgaacagctcaagcgcaacgcgcattgcgtcgacttcggagatcttgtc
gccttgcccgtcaagctgcttgaggctgaggcggccatccgcgcaacgctgcaggcgcag
tatgaccacgtcctggtcgatgagtaccaggacgtgaaccgcagcagcgtgcgcttgctg
agcgcgctgcggccagacgggcgcaatctctggatggtcggcgacgccaagcagtcgatc
tatcggtttcggggtgcgtcatcttttaatatgacccggttcgggaaggaggactttccc
ggcggtaagcgtgggcgattgaagcgcaactatcgctcggtgccggagatcgtcgccaac
ttttccagtttcgcgaccacgatgcgcgcgggcgacgcggacagcggtcttgaagccgat
cgcaacggcaatggccagaagcccgagctgcgcacggtgcagcgcgccgagcagcagcaa
gtggccctggccgacgcgatcgaggcgcttcgccgcgagggacatgcctatcgtgaccag
gcggtgctctgcaccggcaatgagaagctttcgaccatcgggcaggacctcgaacggctc
ggcgtgcccgtgctgtttctgggcagcctgtttgagcgggctgaggtcaaggatctcctg
gcgttgctctccgtccttgtcgatcggcgcgccatgggcctagtgcgcatcgcctgctgg
cccgatttcaggatgtccttcgcggacgtagcgacgatcttcgagtatctgcgggcggcc
gaccaaccttcaggcggttggctccagcacatcgagtcgatccccggcgtcagcgacgcc
gggcgccaggccctcgtcaagctcgcggccgcactcagcggcttcgaccaaacggcgtcg
ccctggaccgtgctcgcgacactgctgcttgatcgcacccgtgtcgcagcgcgccttggc
gtgtcggaggatctcgccgatcgcacgcgcggcatcgcgatctggcagttcctcaacttc
ctgcgggtccagccggccggccgcggcctgccgatcacgcgtgtgctcgatcgcgtgcgc
aggcttgtccgtctcggcgatgatcgcgacctgcgccagttgcccgcggccgcccagcat
ctcgacgccgtgcgtttgatgacgatccatggcgccaagggcctggagttcggcggcgtc
catcttccagggctcaacagcgacaccatcccgcgcacgccgccggcgccaccctgtccg
gcgcccgatggcatgatcgcgggcgccggaggcagtgcgctggaggcctttcgcgcgggc
caagccgaggagcaggagtgcctgttctatgtggctcagtctcgcgcccgcgaccgcctg
atcctttatgcgccgaccgagaagagcaacggccacaatcgaccgctgtcgcccttcctc
gaccgtctcggagccaccctgacgcggggctcggtcgtgccggcgcggccgcttccgatg
gcggcggaagcccacggcatcgagttgatcgtcgacggacggctgcagttcggggcacca
cagatcgccctttatgagtcctgcccgcgccgcttcttctacacgcatgtcttgcaggtc
ggcgggcgccggaccgcgaccgccttcatgcacctgcacgaggcggttcgcgtgatggtc
gaaggggtgatcgcctctgatagccccgtaaccgagcgggacctggaggatcgcaccgac
gtggcgcttgccggtcaggggctcggcgaccatggctatcgcgcggaattccgcgatctg
gccctggcgatgctgcgcttcctcctggccaatcgcgccgacgcggtcgccgaggcgccg
gtcgcgctcagcctcaatttcggcggcgaagagatcatcgttcggccggatgaggtgctg
gtgcggccggacggggtccggaccgtccgccgtatccgcacgggccataggcggtcggcc
gagagcaaggatgtcggcgcggcggcgctgatgctggcggtccagcaggcctttccaggc
gccgtcgcggagctcgtccatctttccgatggcgagacgcatgcgctcgccttgtcggat
cgggagttgaaggggcgcaaggacaagctcgccaagtttctcggcgacatccgcgctggg
cggtttccggcagaggtgtcgtcgcgcacctgcccgaattgcccggccttcttcatctgc
gggcagacccccgatggccctctgcgaaaaaagttcgcctga
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