Sphingopyxis granuli: SGRAN_0323
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Entry
SGRAN_0323 CDS
T04372
Name
(GenBank) RNA polymerase sigma factor
Organism
sgi
Sphingopyxis granuli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
HTH_28
HTH_17
RWP-RK
HTH_Tnp_ISL3
DUF746
GerE
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AMG72720
UniProt:
A0AA86GGH6
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Position
332819..333505
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AA seq
228 aa
AA seq
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MTVQTRTDPGILSDVELAARIAARDRDAVRIVTERNNQRLFRVAWSVLKERAEAEDVVQS
TYMRGFAAIGSFAGRSSLSTWLTRIAINEALGRARARERRRKRLDATSVVDLNDYRDHLM
RGSMQGSKPDAELAQGQIREMLEAAIAQLPSEFRTTFVLREIEGVSVEDAATLLGISPAT
VKTRCLRARRRLQQLLSPELRLALSGSFPFAGADCHALTARVVAQWCG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcagacccggaccgatcccggcatcctgtccgacgtcgaactggcggcgcgg
atcgccgcgcgtgaccgcgatgcggtgcggatcgtcaccgagcgcaacaatcagcggctg
tttcgcgtcgcctggagcgtgctcaaagaacgcgccgaagccgaggacgtcgtgcaaagc
acctatatgcgcggcttcgcggcgatcggcagcttcgcgggccgctcatcgctgtcgacc
tggctgacgcggatcgcgatcaacgaggcgctgggccgcgcccgggcgcgcgagcgccgg
cgaaagcggctcgatgcgacgtcggtcgtcgacctcaacgattatcgggatcatctgatg
cgcggatcgatgcagggcagcaagccggacgccgaactggcgcagggccagatacgcgag
atgctggaggcggcgatcgcgcagcttccgtccgaattccgcaccaccttcgtcctgcgc
gagatcgaaggcgtgtcggtcgaggatgcggcgacgctgctcggcatctcgccggcgacg
gtcaagacgcgctgcctgcgggcgcggcggcggctccagcaactgctgtcgcccgagctt
cgcctcgcgctcagcggcagctttcccttcgccggcgccgactgccatgcgctgaccgcg
cgtgtcgtggcgcaatggtgcggttga
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