Sphingopyxis granuli: SGRAN_2291
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Entry
SGRAN_2291 CDS
T04372
Symbol
uvrD
Name
(GenBank) putative DNA helicase II like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03420
Nucleotide excision repair
sgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SGRAN_2291 (uvrD)
03430 Mismatch repair
SGRAN_2291 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_2291 (uvrD)
Enzymes [BR:
sgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SGRAN_2291 (uvrD)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGRAN_2291 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SGRAN_2291 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMG74657
UniProt:
A0AA86GNK5
LinkDB
All DBs
Position
2487002..2489440
Genome browser
AA seq
812 aa
AA seq
DB search
MAGRFERIMRSGARPKTVRRAAPPRPAALHWTASAPFPNRSRVNSRPASPPDLPPPHPSD
PPYLQGLNGPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAHIIATRRAWPSEILAVTFT
NKAAREMRERIGRMIGDAVEGMPWLGTFHSIAAKMLRRHAELVGLQSNFTILDTDDQLRV
LKQLIQAEGLDEKRWPARQLAGLIDRWKNRGLTPPDLDAADREAYADGKGQHFYALYQAR
LKTLNACDFGDLLLHMLVILKTHRDVLEQYQQRFKYILVDEYQDTNASQYLWLRLLAQAR
KNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQNYRSTPQILAAASALIAQN
SGRLGKTLWTDLEAGDKVRVVGVWDGPEEARRIGEELEDLQRRGTSLDRAAILVRAQFQT
REFEDRFIAIGLPYRIVGGYRFYERAEIRDALAYLRLVQSSADDLAFERIVNVPKRGLGD
KAVSRIHQFARIERTPLFHAAARITETDELTPQARRQLANFVAMMRTWQAKANDLPHPEL
TQLILDESGYTAMLQADRSAEAAGRLENLSELVRAMEEYDSLEAFLEHVSLVMDRDNDDQ
TETVTIMTIHAAKGLEFDHVFLAGWEDGVFPSQRAMDEGGTASLEEERRLAYVAITRARQ
RASIYHAANRRIYGQWMSSIPSRFIAEIPPEFVDSENSFGGGASLWRANWSAQGDPFAHV
ATQSPARTATRGPAWQRALAASSTITRAPAPSEGAPAASVGAKPRADLAIGMRVFHEKFG
YGQIIDVDGNKLEVEFEQAGTKRVLDGFVRAA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgctttgaacggatcatgcgctccggcgcaagaccaaagaccgtccgccgc
gcagcgccgccgcgtcccgccgccttgcactggacagcatcggcgccgttccctaatcgt
tcgcgcgtgaacagccgccccgcctccccgcccgatcttcccccgccgcacccgtcggac
ccgccctatctgcaggggctgaacggcccgcagcggcaggcggtgctgaccaccgaaggc
ccggtgctgatgctcgcgggggcgggcaccggcaagacggcggcgctgacggcgcggctg
gcgcacatcatcgcgacgcggcgcgcgtggccgtccgaaatcctggccgtcaccttcacc
aacaaggcggcgcgcgagatgcgcgagcgcatcggccggatgatcggcgacgcggtcgag
ggaatgccgtggctcggcacctttcacagcatcgcggcgaagatgctgcgccgccatgcc
gaactggtggggctgcagagcaatttcaccatcctcgacaccgacgaccagcttcgcgtc
ctcaagcagctcatccaggccgaggggctcgacgagaagcgctggccggcgcgccagctc
gcggggctgatcgacaggtggaagaaccgcggcctgaccccgcccgacctcgacgccgcg
gaccgcgaagcctatgccgatggcaaggggcagcatttctatgccctttatcaggcgcgg
ctcaagacgctgaacgcctgcgatttcggcgacctgctgctccacatgctggtgatattg
aagacgcaccgcgacgtgctcgaacaatatcagcagcgcttcaaatatatcctcgtcgac
gaatatcaggacaccaacgccagccagtatctctggctccgcctgctcgcccaggcgcgc
aagaacatctgctgcgtcggcgacgacgaccagtcgatctattcgtggcgcggcgccgag
gtggcgaacatcctgcgtttcgaaaaggatttccccggcgcgaccgtgatccgtctcgaa
cagaattaccgctcgaccccgcagattcttgccgccgcctcggcgctgatcgctcagaat
tcggggcggctcggcaagacgctgtggaccgatctcgaggcgggcgacaaggtccgggtg
gtcggcgtctgggacgggcccgaggaagcgcggcggatcggcgaggagctcgaagacctc
cagcgccgcggcaccagcctcgaccgcgccgccatcctcgtccgcgcgcagttccagacc
cgcgagttcgaggatcgcttcatcgccatcggcctcccctaccgcatcgtcggcggctac
cgcttctacgaacgcgcggagattcgcgatgcgctcgcctatctgcgcctcgtccagtcg
agcgccgacgacctggctttcgaacggatcgtcaacgtgccgaagcgcgggctcggcgac
aaggcggtgtcgcgcatccaccagttcgcccggatcgagcgcacgccgctgttccatgcc
gcggcgcggatcaccgagaccgacgagctgaccccgcaggcgcgccgccagctcgcgaac
ttcgtcgcgatgatgcggacctggcaggcgaaggcgaacgacctgccgcaccccgaactg
acccagctgatcctcgacgaatcgggctataccgcgatgcttcaggccgaccgcagcgcc
gaagcggcggggcgcctcgaaaacctctccgaactcgtccgtgcgatggaggaatatgat
tcgctcgaagccttcctcgagcatgtcagcctcgtcatggatcgcgacaacgacgatcag
acggagaccgtcaccatcatgacgatccacgccgcgaaaggcctcgaattcgatcatgtc
ttcctagccggatgggaagacggcgtctttccgtcgcagcgcgcgatggacgaaggcggc
accgcgagcctggaggaggagcgccgcctcgcctatgtcgcgatcacccgcgcccggcag
cgcgcgagcatctatcatgccgccaaccgccgcatctacggccagtggatgagcagcatt
ccgagccgcttcatcgcggagattccgcccgagttcgtcgacagcgagaacagcttcggc
ggcggcgcttcgctttggcgcgccaactggtcggcgcagggcgacccgttcgcgcatgtc
gcgacgcagagcccggcacgcacggcgacccgcggccctgcatggcagcgcgcgctggcc
gcgtcctcgaccatcacccgggcccctgcgccgagcgaaggcgcccccgccgcctcggtc
ggcgcgaagccgcgcgccgacctggcgatcggcatgcgcgtctttcacgagaaattcggt
tacggccagatcatcgacgtcgacggcaacaagctggaggtcgaattcgagcaggcgggc
accaagcgggtcctcgacggcttcgtccgcgccgcctga
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