Streptomyces gobiensis: test1122_06375
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Entry
test1122_06375 CDS
T08145
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03030
DNA replication
sgob03430
Mismatch repair
sgob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
test1122_06375 (holA)
03430 Mismatch repair
test1122_06375 (holA)
03440 Homologous recombination
test1122_06375 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgob03032
]
test1122_06375 (holA)
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_06375 (holA)
Enzymes [BR:
sgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
test1122_06375 (holA)
DNA replication proteins [BR:
sgob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
test1122_06375 (holA)
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
test1122_06375 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
HAD
HTH_IclR
AA_kinase
Motif
Other DBs
NCBI-ProteinID:
UGY91383
LinkDB
All DBs
Position
complement(1356939..1357943)
Genome browser
AA seq
334 aa
AA seq
DB search
MLDAMPPKTKKSPSEDLLAPLTLAVGQEDLLLDRAVRQVIDAARAADADTDVRDLAPGEL
QPGTLAELTSPSLFAERKVVVIRQAQDLPADTVKDVKAYIAAPAEEITLVLVHAGGAKGK
GLLDAARKAGAREVACAKMTKPADRLAFVRGEFRSVGRSATPEACQALVDAIGSDLRELA
SACAQLTADIEGTIDEVVVARYYTGRAEASSFAVADRAVEGRAAEALETLRWALATGVAP
VLVTSALAQGVRAIGKLASAPGGMRPGDLARELGMPPWKIDRVRQQMRGWSADGVAVALR
AVAEADAAIKGGGYDPAYALEKAVVTISRAARSR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgcgatgcccccgaagaccaagaagtccccgtccgaggacctgctcgcgccc
ctgacgctcgccgtcggccaggaggatctgctccttgaccgtgccgtgcggcaagtgatc
gatgccgcccgcgccgccgacgcggacaccgatgtacgggacctcgcgcccggcgagctt
cagcccggcacgctcgccgagctgaccagtccttcgctcttcgccgagcgcaaggtcgtc
gtcatacggcaggcgcaggatctgcccgcggatacggtcaaggacgtcaaggcgtatatc
gccgcccccgccgaggagatcaccctggtgctggtgcacgccgggggcgccaagggcaag
gggctgctggacgccgcccgcaaggcgggcgcccgggaggtcgcctgcgccaagatgacc
aagcccgccgaccggctggcgtttgtacggggtgagttccgttcggtgggccgctcggcc
accccggaggcctgccaggccctggtcgacgccataggcagcgatctgcgcgagctggcc
tcggcctgtgcgcagctcaccgcggatatcgagggcaccatcgacgaggtggtcgtcgcc
cgttactacacgggccgcgccgaggcatccagcttcgccgtcgcggaccgggccgttgag
ggccgggccgctgaggcgctggagaccctgcgctgggcgctggccaccggggtggccccg
gttctggtcaccagcgccctggcccagggcgtgcgggccatcggcaagctggcctccgcg
cccggcggaatgcgtccgggcgatctcgcccgggagctgggtatgcccccgtggaagatc
gaccgggtccggcagcagatgcggggctggtccgcggatggcgtggccgtggcattgcgt
gccgtggcggaggccgacgcggcgatcaagggcggcggatacgacccggcgtatgccctg
gagaaggcggtggtcaccatctcccgggccgctcgctcccgctga
DBGET
integrated database retrieval system
