Streptomyces gobiensis: test1122_12065
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Entry
test1122_12065 CDS
T08145
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03030
DNA replication
sgob03430
Mismatch repair
sgob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
test1122_12065
03430 Mismatch repair
test1122_12065
03440 Homologous recombination
test1122_12065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgob03032
]
test1122_12065
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_12065
Enzymes [BR:
sgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
test1122_12065
DNA replication proteins [BR:
sgob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
test1122_12065
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
test1122_12065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
Rad17
AAA_30
AAA_14
zf-CXXC
AAA_5
AAA_18
AAA_19
AAA_16
nSTAND3
T2SSE
Mg_chelatase
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
UGY92387
LinkDB
All DBs
Position
complement(2606137..2608269)
Genome browser
AA seq
710 aa
AA seq
DB search
MSSLALYRRYRPETYAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGQCQSCRDLARNGSGSIDVIEIDAASHGGVDDARELREKAFFGPAAS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLAEVCEHEAIPVEESVLPLVVRAGAGSVRDSMSVMDQLLAGAGEDGVTYAMA
TALLGYTDGALLDSIVDAFAAGDGAAAFEVVERVIEGGHDPRRFVTDLLERLRDLVILAA
VPDAAEKSLIDAPVDVVERMQAQASVLGAAELSRAADLVNSGLTEMRGATSPRLQLELIC
ARVLLPAAYADERSLQARMDRLERGAMAGGLTAPAAGAAAATPAPAAPAAAQPPAPAPAP
AAPATEPAVPEATGEPVQQSPGKRPGAWPTGAGAGQRPGAWPTGGTGGTGGQSGGAAAAP
GPAEPQAQPQAPGPVAPAAPAAGPPPGQGAAQVRQMWPDILEAVKSRRRFTWILLSQNAQ
VTGFDGTTLQLGFSSTGARDRFVGGGSEDVLRTVLSEQFGVQWKVESIVDPSGGSGGNGG
SGGSEGNGGVGGAGPATPPAPRPPQSAAPAPPPPPAATPAPAPAPAAPGPGPALVPPPQA
APEPPPPPPVSAEDDIPEEDDPDLDESALSGHDLFIQQLGATVVEEFHHE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtccctcgcgctgtaccgccgctaccgccccgagacctacgccgaggtcatcggg
caggagcatgtaaccgacccgctgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tatctcttcagtggcccgcgcggctgcggtaagacgaccagcgcgcggattctcgcccgc
tgtctcaactgtgagcagggccccacgcccacaccgtgcggccagtgtcagtcgtgccgc
gatctcgcgcggaacggtagtgggtcgatcgatgtgatcgagatcgacgccgcttcgcat
ggtggtgtggatgacgcgcgtgagctccgtgagaaggcgttcttcggcccggccgccagc
cggtacaagatctacatcatcgacgaggcgcacatggtcacctcggcgggcttcaacgcc
ctgctgaaggtggtcgaagagcccccggagcatctgaagttcatcttcgcgacgaccgag
ccggagaaggtcatcgggacgatccggtcgcgtacacatcactatccgttccggctggtg
ccgccgggcacgttgcgtgactatctggccgaggtctgtgagcacgaggcgatcccggtc
gaggaatcggtgttgccgttggtcgtacgggccggggcggggtccgtacgggactcgatg
tcggtcatggaccagctcctggccggggccggggaggacggcgtcacgtatgcgatggcg
acggcgttgctcggctatacggatggtgcgctgctcgactccatcgtggacgccttcgcg
gcgggggacggggcggcggccttcgaggtcgttgagcgggtaatcgagggcggccatgat
ccgcggcgctttgtcaccgatctgctggagcggctgcgagatctggtgatcttggcggcg
gtgccggatgcggcggagaagtcgctgatcgacgccccggttgatgtggtggagcggatg
caggcccaggcgtcggtcctcggtgcggctgagctgagtcgtgcggcggatctggtgaac
tccgggctgacggagatgcgcggggcgacctcgccccggttgcagctggagttgatctgt
gcccgggtgctgctgcccgcggcgtacgccgatgagcggtcgcttcaggcgcggatggac
cggctggagcggggggcgatggccggtggtctgacggccccggcggctggggcggctgcg
gctaccccggccccggctgccccggctgcggctcagccgcccgctcccgcccccgctccc
gctgctcctgcgacggagccggcggtcccggaagccactggtgagcccgtacagcagtca
ccgggcaagcgcccgggcgcctggccgacgggtgcgggggccgggcagcggcccggggcc
tggccgacgggcggtacgggcggtacgggcggccagtccggtggcgcagccgcagccccc
ggtccggcggagccccaggctcagccccaggcgcccgggccggtggcgcccgccgctccg
gcggctggtcctccgcccggacagggcgccgctcaggtacggcagatgtggccggacatc
ctggaggccgtgaagagccgtcgacggttcacttggatcttgctcagccagaacgcgcag
gtcaccggctttgacggtacgacgttgcagcttggcttctccagcacgggcgcccgggac
aggttcgtcgggggtggcagcgaggacgtgctgcgcacggtgctgagcgagcagttcggc
gtgcagtggaaggtcgaatccatcgtcgacccctcgggcggcagcggcggaaacggcgga
agcggcggcagcgagggaaacggcggcgtcggcggagcaggccccgccactccgccggcg
ccccggccgccgcagtccgccgcacccgccccgccgcccccaccggcagccacgcccgcc
cccgcccccgcaccggcggccccggggccagggcccgccctggttccgccgccccaggcg
gcacccgagccgccaccgccgccgcccgtatcggccgaggacgacatccccgaagaggac
gacccggacctcgacgagtcggcgctgtccggccatgatctgttcattcagcagctgggt
gcgacagtcgtagaagagttccatcacgagtga
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