Streptomyces gobiensis: test1122_18470
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Entry
test1122_18470 CDS
T08145
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03420
Nucleotide excision repair
sgob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
test1122_18470
03430 Mismatch repair
test1122_18470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_18470
Enzymes [BR:
sgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
test1122_18470
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
test1122_18470
MMR (mismatch excision repair)
Other MMR factors
test1122_18470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UGY93511
LinkDB
All DBs
Position
3939975..3943295
Genome browser
AA seq
1106 aa
AA seq
DB search
MASPLNDPGQLKELLGIPFTPEQLACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAADRVLGLTFTNKAAGELAERVRKALIRAGVMDPDPDPAGPQESPGEPVISTYHAFAGR
LLKEHGLRLGIEPTARLLADATRFQLAASVLRGAPGPYEALTKTISALVEDLLALDGELS
EHLVEPARLRTYDTELLDLLESGEVRLTNAAMRKVPEAARGRRELLGLVEEYRSRKRQRD
LLDFGDQIALAARLARDRPEVGRILREEFSVVLLDEYQDTSVAQRILLAGLFRDGTGHPV
TAVGDPCQAIYGWRGASVANLDEFPRHFPHADGTPARRFALSENRRSGGRLLELANELAA
PLRARHQGVEALRPAPGAERDGLVRCALLNTHAEELDWLADSLAHLVRTGTPPGEIAVLC
RSAADFAEIQGTLVARDVPVEAVGLSGLLHLPEVADLVAMCEVLQDPTANASLVRLLTGP
RWRIGPRDLALLGRRARLLVHYAPDEPDPDADRRLAAAVEGTDPAEVTSLADALDTFLES
DGYDDGLPFSAEARVRFARFATEIRELRRSLADPLMDVLHRVLAATGLEIELSASPHALA
ARRRETLGKFLDIAAGFTSLDGETTLLAFLGFLRTAAQYEKGLDSSLPGGENTVKVLTAH
KSKGLEWDVVAVPGLVAGQFPSERAQDSWLTQPKVLPHALRGDAATLPQMGEWTAQGRKD
YDAAMKHHQSTEELRLGYVTFTRPRSLLLASGHWWGPSQKKPRGPSAFLDALRAHGEVEA
WADPPPDGAENPSLTHPTTEHTWPLPLDEPALTRRRTAANAVLAHLDGVPENFVPENFVP
EEAVPEEAVPEEPVPEEPVPEEPADGLSPEEARLTASWDRDLDALAGELRRARETVREVP
VPASLTATELLRLAADPEQFARDLARPMPRPPQPAAARRGTRFHAWVESRFEELALPMLG
PDELPGAEDGVELTDERDLATLKEAFSRTSYAHRTPYRVEAPFQLPLAGRVIRGRIDAVY
KSPDGDGFEIIDWKTGRAQRADPLQLAIYRLAWAEQHGLPLTAVSAAFLYIRSGELIRPD
DLPDRAGLERLLLDGRTDAPDPDDGG
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcaccgctcaacgaccccgggcagctcaaagagctcctgggcatccccttcacc
cccgagcagctggcgtgtatcaccgcaccgccggctccgcaggtgattgtggccggagcc
gggtccggtaagacgaccgtgatggccgcccgagtcgtctggctggtcggcaccggacag
gtcgccgccgaccgggtgctcggcctcaccttcaccaacaaggcagcgggcgagctcgcc
gagcgggtccgcaaggcgctgatccgggccggggtcatggacccggacccggacccggcc
ggtccgcaggagtcaccgggcgagccggtgatctccacctatcacgcctttgccgggcgg
ctgctcaaggaacacgggctacggctgggcatcgaacccaccgcccggctgctcgccgac
gccacccgctttcagctcgccgcgtcggtgctgcgcggcgcccccggcccgtatgaggcg
ctgaccaagaccatcagcgccctggtcgaggacctgctcgcgctggacggcgagctctcc
gagcacctggttgagccggcccggctgcgcacctacgacaccgagctgctggacctgctg
gagagcggtgaggtacggctcaccaacgccgcgatgcgcaaggtgcccgaggccgcgcgt
ggccgccgcgagctcctcgggcttgtcgaggagtaccggagccgtaagcgacaacgcgac
ctgctcgactttggcgaccagatagccctggccgcgcgtctcgcccgggaccggcccgag
gtgggccggatcctgcgcgaggaattctccgtggtcctcctcgatgagtaccaggacacc
tcggtcgcccagcgcatcctcctcgccgggctcttcagggacggcaccgggcatcccgtc
accgccgtcggcgacccctgccaggccatctacggctggcgcggtgcgtccgtcgccaac
ctcgatgagttcccccgccacttcccgcacgccgacggcacccccgcccgccgcttcgcg
ctcagcgagaaccgccgcagcggcggccgtctgctggagctggccaacgagctggccgcc
ccactgcgcgcccgccaccagggcgtcgaggcgctgcgccccgcccccggcgccgagcgc
gacggcctcgtccgctgcgccctgctgaacacccacgccgaggagctcgactggctcgcc
gactccctcgcccatctggtccgtaccggcaccccgcccggcgagatcgcggtgctctgc
cgcagcgcggccgacttcgccgagatccagggcacgctcgtggcccgggacgtgccggtc
gaggccgtggggctctccgggctgctgcatctgccggaggtcgccgacctcgtcgccatg
tgcgaggtgcttcaggacccgaccgccaacgcctccctcgtccggctgctcaccggcccc
cgctggcgtatcggcccccgcgacctggccctgctcggccgacgggcccggctgctggtc
cactacgccccggacgagccagacccggacgccgaccgccgcctggccgccgccgtcgaa
ggcaccgacccggccgaggtcacctcactcgccgacgccctcgacaccttcctggagtcc
gacggctacgacgacgggctgcccttctccgccgaggcccgtgtccggttcgcccggttc
gctacggagatacgcgagctgcggcgctcgctcgccgatcccctgatggacgtcctgcac
cgggtgctggccgccaccggactggagatcgagctgtcggcctccccgcacgcgctggcc
gcccgccgccgcgagacgctgggcaagttcctcgacatcgccgcgggcttcacctccctc
gacggcgagacgacgctgctggccttcctcggcttcctgcgtaccgcggcccagtacgag
aaggggctcgacagctcgctgccgggcggcgagaacacggtgaaggtgctcaccgcgcac
aagtccaagggcctggagtgggacgtcgtcgccgtccccggcctggtcgcgggccagttc
cccagcgagcgggcccaggactcctggctcacccagcccaaggtgctgccgcacgccctg
cgcggcgacgcggcgaccctcccgcagatgggggagtggaccgcgcagggccgcaaggac
tacgacgcggcgatgaagcaccaccagtccaccgaggagctgcgcctgggctacgtcacc
ttcacccgcccccgctccctcctcctcgcctccggccactggtggggcccctcccagaag
aaaccccgcggtccctccgccttcctggacgccctccgcgctcatggcgaggtggaagcc
tgggccgatcccccgccggacggcgccgaaaacccctccctcacccaccccaccaccgaa
cacacctggccgctccccctggacgagcccgccctgacccgccgccgcaccgccgccaac
gcggtgctggcgcacctggacggggtgcccgagaacttcgtgcccgagaacttcgtgccc
gaggaggccgtgcccgaggaggccgtgcccgaggagcccgtgcccgaggagcccgtgccc
gaggagcccgccgacggcctctcgcccgaggaggcacggctcaccgcgtcctgggaccgg
gacctggacgccctcgccggggagctgcggcgcgcccgtgaaacggtccgcgaagtgccc
gtaccggcgtccctcaccgctaccgagctgctccgcctggccgccgaccccgagcagttc
gcccgcgacctggcgcgccccatgccccgcccgccgcagcccgccgcagcccgccgtggc
acccggttccacgcctgggtggagtcacgcttcgaagagctcgcgctgcccatgctcggc
cccgacgagctgcccggcgccgaggacggtgtggagctcaccgacgagcgggacctcgcc
acgctcaaggaggccttcagccgcacctcctacgcccaccgcaccccctatcgagtcgaa
gcccccttccagctccccctcgcgggccgggtcatccggggccgtatcgacgcggtgtac
aagtccccggacggggacggcttcgagatcatcgactggaaaaccggacgcgctcagcgt
gccgaccccctccagctggccatctaccggctcgcctgggccgagcagcacgggctgccg
ctgaccgccgtatccgccgccttcctgtatatccgcagcggcgagctgatccgccccgac
gacctgccggaccgggccgggctggagcggctgctgctcgacgggcggacggatgcaccg
gacccggacgacggcggatag
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