Schistocerca gregaria (desert locust): 126334829
Help
Entry
126334829 CDS
T08688
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03020
RNA polymerase
sgre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126334829
09124 Replication and repair
03420 Nucleotide excision repair
126334829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgre03021
]
126334829
03400 DNA repair and recombination proteins [BR:
sgre03400
]
126334829
Enzymes [BR:
sgre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126334829
Transcription machinery [BR:
sgre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126334829
DNA repair and recombination proteins [BR:
sgre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126334829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
126334829
NCBI-ProteinID:
XP_049853446
LinkDB
All DBs
Position
2:710839710..710888078
Genome browser
AA seq
1903 aa
AA seq
DB search
MSTNDSKAPVRYVKRVQFGILSPDEIRRMSVTEGGIRYSETYEGGRPKLGGLMDPRQGVM
DRNSRCQTCAGNQTECPGHFGHIDLAKPVFHVGFLTKTIKILRCVCFYCSKLLVSPTNPK
IKEVVMKSKGQPRKRLTYVYDLCKGKNICEGGDEMDLNKDNPDDPNNQQPRKQGHGGCGR
YQPSIRRAGLDLTAEWKHVNEDSQEKKISLSAERVWEILKHITDEECFILGMDPKFARPD
WMICTVLPVPPLSVRPAVVMYGSARNQDDLTHKLADIIKSNNELMRNEQAGAAAHVISEN
IKMLQFHVATLVDNDMPGLPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTV
ITPDPNLRIDQVGVPRSIAQNMTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGER
IDLRFHPKSSDLHLQCGYKVERHVRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNL
SCTSPYNADFDGDEMNLHVPQSMETRAEIENLHITPRQIITPQANKPVMGIVQDTLTAVR
KMTKRDVFLEKEQMMNLLMFLPIWDGKMPQPAILKPKPLWTGKQLFSLIIPGNVNMIRTH
STHPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICFLELGHEVCG
QFYGNIQTVVNNWLLLEGHSIGIGDTIADPQTYTEIQKAIKKAKEDVIEVIHKAHNMELE
PTPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIA
CVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREG
LIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNL
PTIKLSNKTFEKKFKFDPTNERHLRRIFHEDVLRELMGSSEVISELEKEWEQLCRDREAL
RQIFPSGESKVVLPCNLQRMIWNVKKIFHINERAPTDLSPLRVIEGVNDLLKKCVIVAGE
DHLSKQANENATLLFQCLVRSILCTKSVSEEYRLSTEAFEWLIGEIETRFQQAQCSPGEM
VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGA
AARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNIYYEMPDFDPTR
ISPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDE
NKFQEEGETVDKMEDDMFLRCIEANMLSEMTLQGIEAIGKVYMHLPQTDSKKRIVITETG
EFKAIAEWLLETDGTSMMKVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSVEKEMNTVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHA
EVDPMRGVSENIIMGQLPRLGTGAFDLLLDADKCKAGIEIPMSVGAGMMGGAGMFFGSAA
TPSMSPQMTPWNQGTTPAYNSGWSPVLGSGMTPGGPCFSPSGASDASGMSPGFSPWSPTP
GSPSSPGPAMSPYLPSPASPTYAPSSPAYAPTSPSLTPSSPHYSPTSPSYSPTSPHYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPASPSYSPSSPNYTPAS
PSYSPTSPSYSPSSPRYSPTSPSYSPSSPKYSPTSPSYSPTSPSFASSPQFTPASPQYSP
SSPAYSSTSPSYSPSSPKHTPSGSTRYSPSSPNYSPTSPLYSPTSPQYSPAASSKYSPTS
PTYTPTSPNYSPSSPTYSPGGAPGYSPTSPTYSPSSPSYETDD
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaatgattctaaggcgccagtgcgttatgtcaaacgtgtgcagttcggcatc
ctttctccagatgaaattcgacgtatgtcagtcacagagggcggtatccgctactcggaa
acgtatgaaggtggtcgaccaaagctcggtgggctgatggatccacgacagggtgtaatg
gacagaaattcccgatgtcagacctgtgcaggaaaccaaactgagtgtcctggacacttt
ggtcacatagatctcgcaaagccagtgttccatgttggtttccttaccaaaactataaag
attctgcgttgcgtttgtttttattgttcaaagcttctcgtcagtccgactaatccaaag
attaaggaagttgttatgaaatcaaaaggtcagccaagaaagcgacttacttatgtatat
gacctgtgcaagggaaagaacatttgcgaaggtggtgatgagatggatttgaataaagat
aaccctgatgatcccaacaatcaacagcctcgtaagcaaggtcatggaggttgtggcaga
taccagccaagtattcgtcgcgctggacttgatttgactgctgaatggaagcatgtcaat
gaagattcacaagagaagaaaatcagcttaagtgcagagagagtctgggaaatcctgaaa
cacataacagatgaagaatgcttcattcttggaatggatccaaaatttgcaaggcctgat
tggatgatatgtacagtacttcctgtgccaccactttcagtgcgccctgctgttgttatg
tacggttctgcaagaaaccaggatgatctcacacacaagctcgctgatattataaaatcc
aataatgaactgatgcgaaatgaacaggctggagctgcagcacatgtgatatcagaaaac
atcaaaatgttgcagttccatgttgccacattagtcgataatgatatgcctggtctacca
cgtgcaatgcagaagtccggaaaacctctgaaagccataaaagctcggttaaaaggaaaa
gaagggagaatacgaggaaatttgatgggtaaacgagtggatttttcagcaagaactgta
attactcctgacccaaatcttcgtattgatcaagttggtgttccgaggtccatcgcacag
aacatgacatttcctgaaatagtaactccttttaacattgacaagatgcaagaattggta
cgtagaggaaattcgcagtatccaggtgcaaaatacatcgtccgtgacaatggagagcgt
attgatttgcgtttccatccaaaatcttcagatctgcatttgcagtgtggatataaagta
gaacgacatgtccgtgatggagacttggtgatttttaatcggcaaccaactcttcacaaa
atgtcaatgatgggacatcgtgttaaagttttaccatggtcaacattccgtatgaatctc
agttgcacatcaccatacaatgctgatttcgatggtgatgaaatgaatctgcatgtgcca
cagtcaatggagacaagagcagagattgaaaatctccacatcactcctaggcaaatcatt
actcctcaagcaaacaaaccagttatgggtattgtgcaggacacactcacagctgtgagg
aagatgacaaagagagatgttttccttgaaaaggaacaaatgatgaatcttcttatgttt
cttccaatttgggatggaaagatgccacaaccagccattctaaagcctaaacctctctgg
acaggcaagcagttgttttctctcataattcctggtaacgtgaacatgattcgtactcat
tccacacatcctgatgaagaagatgatgggccctacaaatggatatctccaggtgacaca
aaggtaatggtggagcatggtgaacttgtgatgggcattctgtgtaagaaaacactggga
acatcagccggttctctactgcatatttgtttcctggaattgggtcatgaagtgtgtggt
caattttatggaaatattcagactgttgtgaacaactggctgctattggaaggtcactca
attggtattggagacaccattgctgatcctcagacttacacagaaatccagaaagcgatc
aaaaaagctaaggaagatgtaatagaagttattcataaagctcacaacatggagcttgaa
ccaactcctggtaatactctgcgacagactttcgagaatcaggtgaacagaatactgaat
gatgctcgagacaaaactggtggttctgccaagaagtctctgacagagtacaataactta
aaagctatggtggtttcaggttccaaagggtcaaacatcaacatctctcaggtcattgct
tgtgtgggacaacaaaacgttgaaggaaagcgaataccatttggttttcgcaaacgaaca
ttaccacattttattaaagatgactatggtcctgaatccagaggttttgttgaaaactca
tatctggccggtctcacaccctcagaatttttctttcatgctatgggtggtcgagaaggt
cttattgatacagctgtgaaaactgctgaaacaggatacatccagcgtcgtctgataaag
gctatggaaagtgtaatggtgcattatgatggaacagtacgtaattctgtgggtcagctc
attcagttgcgttatggggaagatgggttgtgtggtgagactgtggaatttcagaatctc
ccaaccatcaaactgtcaaataaaacattcgaaaagaagttcaagtttgacccaacaaat
gaacggcacctgcgtcgtatattccatgaagatgtcctgcgagaattaatgggcagcagt
gaagtaatatctgaacttgagaaggaatgggagcagctgtgcagagatcgcgaggctctt
aggcagatattcccaagtggagaaagcaaagttgtgttgccatgcaacttgcagcgtatg
atatggaatgtgaagaaaattttccatataaatgaacgtgcccctacagatcttagtcca
ctcagagttattgaaggtgttaatgaccttttgaagaagtgtgtcattgtagcaggagag
gatcatctgagtaaacaagcaaatgagaatgctactttactatttcagtgcttagtgagg
tctatactctgtacaaagagtgtttcagaagaatacagattatctactgaagcatttgag
tggctgattggtgaaatagagacaagatttcaacaggcacagtgtagtcctggtgaaatg
gtgggagctttggctgcccagtcacttggagaaccagccacacaaatgacactgaacaca
tttcactttgctggtgtatcttccaagaatgtaactctgggtgtaccaagattgaaggaa
atcattaacatcagtaagaaaccaaaggctccatcattgacagtattcttaacaggtgca
gctgcaagagatgcagaaaaagcaaagaacgttctttgtcgtttggaacacacaacattg
aggaaggtgactgcaaatactgctatctattatgatcctgacccacaaaacacagtcatt
gcagaagaccaagaatttgtgaatatctactatgaaatgccagactttgaccctactagg
atatcaccgtggctactccgtatagagcttgatcgtaagagaatgacagataaaaagctg
actatggaacagatagcagaaaaaataaatgctggttttggagacgatttgaactgtata
tttaatgatgataatgctgaaaaattggttctccgcatcagaattatgaatagtgatgaa
aataagtttcaagaggaaggagaaaccgttgataaaatggaagatgatatgttcctcaga
tgtattgaggcaaatatgctgtcagaaatgactctgcagggtattgaagccattggaaaa
gtgtacatgcatcttcctcaaactgattcgaagaaaaggattgtaattacagaaactggt
gagttcaaagccattgctgagtggcttctggaaactgatggaacaagtatgatgaaagta
ctcagtgagagagatgtagatcctgtcaggactttctccaatgacatctgtgaaattttc
tctgtactgggtatagaggctgtgcgtaaatcagttgagaaggaaatgaacacagttctg
cagttctatggtctctatgtaaactatcgacatcttgctcttctgtgtgacgtgatgaca
gctaaaggtcatttgatggctatcacacgtcacggaattaacagacaggataccggagcg
ctaatgagatgttcctttgaagaaacagtcgacgtgcttatggatgctgcttcacatgca
gaagttgatccaatgagaggtgtctcagaaaatattattatggggcagctgccgcgatta
ggcacaggtgcatttgatttgttgcttgacgctgacaaatgcaaagcaggaatagaaata
ccaatgagtgtgggagctggcatgatgggaggagcaggaatgttctttggtagcgcagca
acgccatcaatgagtccacaaatgaccccgtggaaccaaggaactacacctgcatacaac
agtggctggtcaccagttcttggcagtggcatgacccctggaggtccttgtttctcacca
tcaggagcaagtgatgcaagtggcatgtcaccaggcttctctccatggtcaccaacacca
ggaagtccatcatcaccaggacctgcaatgagcccataccttcctagtcctgcatctccc
acatatgctccttccagcccagcttatgctccaacatcaccaagcttgacaccctccagc
ccacattacagtccaacaagcccttcatacagccccacttctccacactattcaccaaca
agtccttcttattctccaacttcgccttcatacagtcccacttctccttcctacagccct
acatcaccatcttacagtccaacatctccatcttacagtccaacatctccttcttatagc
ccaacatcaccatcttacagcccaacttctccttcctacagcccaacttcaccatcgtac
agcccaacttcaccatcttacagtccaacatctccttcgtacagccccacctctccatcc
tatagcccaacgtctccttcatattctcctaccagcccatcctattcacccacaagtccc
tcatacagtcctgctagtccaagctactctcctagctctccaaattacactcctgcttca
ccatcatattctcctaccagcccttcgtattcaccaagctcacccagatattcaccaaca
agtcccagctattcccccagtagtcccaaatattcaccaacatctccatcctactcacca
acatcaccctcttttgcctcatcccctcagttcacacctgcttctcctcagtattcacca
agctctcctgcttacagttccacttcaccttcatactcaccaagttctccaaaacatact
cctagtggatccacacgttactcaccgtcatctccaaattattcacctacaagccctctg
tactcaccaacaagccctcaatactcacctgctgcaagctcaaagtattcacctaccagt
ccaacatacacccctacatcacccaactacagtccatcatccccaacgtactcacctgga
ggggctcctggctactctccaacttcaccaacatattcaccatcgtctccttcgtatgag
acagatgattaa
DBGET
integrated database retrieval system
