Streptomyces griseochromogenes: AVL59_33855
Help
Entry
AVL59_33855 CDS
T04729
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AVL59_33855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgs03021
]
AVL59_33855
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_33855
Enzymes [BR:
sgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AVL59_33855
Transcription machinery [BR:
sgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AVL59_33855
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AVL59_33855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ANP53882
UniProt:
A0A1B1B546
LinkDB
All DBs
Position
complement(7852162..7852434)
Genome browser
AA seq
90 aa
AA seq
DB search
MSSSITAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVD
THVHEKPLSIALREINAGLLTSEAVEGPAQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcttccatcaccgcgcccgagggcatcatcaacccgccgatcgacgagttgctt
gaggccaccgactcgaagtacagcctcgtgatctacgccgccaagcgggcccgtcagatc
aacgcgtactactcgcagctcggcgagggcctcctcgagtacgtcggcccgctcgtcgac
acccacgtgcacgagaagccgctctcgatcgccctgcgtgagatcaacgccggtctgctg
acctccgaggccgtcgagggcccggcgcagtag
DBGET
integrated database retrieval system