Streptomyces gardneri: H4W23_07245
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Entry
H4W23_07245 CDS
T07252
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H4W23_07245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_07245
Enzymes [BR:
sgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4W23_07245
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H4W23_07245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DUF1344
C1_1
Motif
Other DBs
NCBI-ProteinID:
QPK44422
LinkDB
All DBs
Position
complement(1618301..1620430)
Genome browser
AA seq
709 aa
AA seq
DB search
MSSENENSDGPEQLALIRETVRKANVPRAKPRTWRGAALAKELPVARVVVNKGSLHLDQF
FDYAVPEELDDIAKPGVRVRVRFGAGAHQVRNGRREGGRLIDGFLVERRATSDYSGPLAA
LADVVSPEPVLGPELLGLARAVADRYAGSLADVLQLAVPPRSARAEGRTSPEPLPPPKRP
EPGSWTRYEQGAAFLDSLARGGAPRAVWNALPGPHWAEEIARAVAATLASGRGALVVVPD
GRAAGRVDAALTEVLGDGRHALLTAEAGPEKRYARWLAVRRGSVRAVVGTRAAMFAPVRD
LGLAVIWDDGDGSHSEPHAPQPHAREVLLLRAAHDRCAFLLGSTSCTVEAAQLVESGWAK
ALGAGREQVRRAAPLIRTVGDGELARDEAARAARLPSLAWQAVREGLKTGPVLVQVPRRG
YVPRLACERCRTPARCRHCAGPLEAPEQQELRCGWCGRGAPDWHCVACGSNRLRAQIVGA
RRTAEELGRAFPAVPVRTSGRDHILDTVPGRPALVVSTPGAEPVAEGGYAAALLLDGWAM
LGRPDLRAGEEALRRWIDAASLVRGQPEGGTVVVVAEPTLRPVQALVRWDPVGHAQRELA
ERAELGFPPVSRMAAVSGPPEAVEGFLAAAGLPGDAEVLGPVPLAVVRPGGPRRPGDPPP
GEQWERALVRVPPGSGAALAAALKQARAAGLARGGGEPVRIRVDPPDIG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgagaacgagaattccgacgggcccgagcagctcgcgctcattcgggagacc
gtgcggaaggcgaacgtgccgcgggccaagccgcggacctggcgtggggccgcgctggcc
aaggagctgcccgtcgcccgggtcgtcgtgaacaaggggtcgctccacctcgaccagttc
ttcgactacgcggtcccggaggagctcgacgacatcgccaagcccggggtgcgcgtccgg
gtgcggttcggggcgggcgcccaccaggtgcggaacgggcgccgcgagggcggacggctg
atcgacggcttcctcgttgagcggcgggccacctccgactactcggggcccctcgcggcc
ctcgccgacgtcgtctcgcccgagccggtgctcggccccgagctgctcggcctcgcgcgg
gccgtagccgaccggtacgcgggcagcctcgccgacgtgctccagctcgccgtgccgccg
cgcagcgcccgcgccgagggccggacctctccggagcccctgccgccgccgaagcgcccg
gagccgggcagctggacgcggtacgagcagggggcggccttcctggactccctcgcgcgt
ggcggggcgccccgggccgtgtggaacgcgctgccgggaccgcactgggccgaggagatc
gcccgcgccgtcgccgcgaccctggcctccggccggggcgccctcgtcgtcgtaccggac
ggccgggcggccgggcgggtcgacgcggcgctgaccgaggtcctgggggacgggcggcac
gcgctcctcaccgccgaagcgggccccgagaagcggtacgcgcgatggctcgccgtccgg
cgcggctccgtgcgggccgtcgtcggcacccgggccgcgatgttcgcccccgtgcgggac
ctcggactcgccgtcatctgggacgacggcgacggcagccacagtgaaccgcacgccccg
cagccccacgcgcgcgaggtcctcctgctgcgcgccgcccacgaccggtgcgccttcctc
ctcggcagcacgagctgcaccgtcgaagccgcccagctggtggagtccggctgggccaag
gccctcggcgccggacgcgagcaggtccgcagggccgcccccctgatccggaccgtcggc
gacggcgaactggcccgcgacgaggccgcgcgcgccgcccggctgccctcgctggcctgg
caggccgtacgggaggggctgaagaccgggccggtgctcgtccaggtcccccggcgcgga
tacgtcccccggctggcctgcgagcgctgccggacgcccgcccgctgccgccactgcgcc
gggcccctggaggcccccgagcagcaggagctgcgctgcggctggtgtgggcgcggcgcg
cccgactggcactgcgtggcgtgcggctcgaaccggctgcgggcccagatcgtgggcgcg
cggcgtacggcggaggagctcggccgggcgttccccgcggtgccggtacggacctcgggg
cgcgaccacatcctggacaccgtgcccgggcggccggcgctcgtcgtctccacccccggc
gccgaacccgtcgccgagggcggctacgcggccgcgctgctcctcgacggctgggccatg
ctcggccggcccgacctgcgcgcgggcgaggaggcgctgcgccgctggatcgacgcggcc
tcgctggtgcggggccagcccgagggcggcacggtcgtcgtggtcgccgagccgacgctc
cgcccggtccaggcgctcgtccgctgggacccggtgggccacgcccagcgggagctggcc
gagcgggccgagctgggcttcccgccggtctcccggatggcggcggtgtcaggtccgccg
gaggcggtcgaagggttcctggcggcggccgggctgccgggcgacgcggaggtcctcggt
ccggtgccgctggcggtggtccgccccggcgggccgcgccgtcccggggatccgcccccg
ggcgagcagtgggagcgcgccctggtccgggtgccgccgggcagcggcgcggccctcgcg
gcggccctcaagcaggcccgggcggccgggctcgcgcgcggcgggggcgaacccgtgcgg
atccgcgtcgaccccccggacatcggctga
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