Streptomyces gardneri: H4W23_20875
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Entry
H4W23_20875 CDS
T07252
Name
(GenBank) PAS domain-containing protein
Organism
sgx
Streptomyces gardneri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
PAS_7
HisKA
Motif
Other DBs
NCBI-ProteinID:
QPK46837
LinkDB
All DBs
Position
complement(4627278..4631090)
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AA seq
1270 aa
AA seq
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MSSRPSRGAARLAAILDALPDGLVLVNCNGTVVNANTIALGMFETPGTALVGRGLLDLLP
DFDSRLIPGSMRRPEGTDERGRTKPTRMIARRTDGGEFPVEVTSASLEDGREAYDSYSGY
TGDELLMLVVRDLTGTLDTEAELARSQRQTEMILRAASEGVVGTDTDGRVVLVNPAAAQI
LGYRAGELGGQELHPLILATRADGEPFPYEESPLADTLKSGRKHRVRGQVLWAKKGDRVP
VDLTTAPVRDGDQLVGAVMTFTDRRPYEQLAEEHATELADRAERHAVEREAQQERYASLA
ARHEQLTAVLAESLRGPLEELRGRLGALAADDAGQLWPEANQVLHHLTAGYARMTALVDN
VLAYQRLDAGTEELDRRVALLDGVVTAGIDAAVELIGPGRAQFAVHAPPIEAEVDPDRLA
TALAHLVADVAGVDATGKNRAAAQGAGPVDSTIVVAAAQRGDVVRIEVRGPYAGGDPVHG
PVVRGIVAAHGGVVQTHEVPGTSGGAYVLEVPLGAGRGTVPAPAPAPVPAGSPGADPQDA
GVRELPALPAQATGAEGETSGGGRRRARRASTDAFLESPVAPEAAEPGGRRRARTEEATG
PAELIPAQQNAGADGSAMAALPASASASLPSSGPFALPSAAPAAPAAEPTGRRRGRPAEG
SVVTAAEGAQGRAALGAAVPPQGVAAAEHLHAPAGASAHGPALALPAVASGGDAPAAPPS
GRRRRALAAAQERAAAAESGPRTPFALPPADADRPESADPAEAVTAVPVPASVPVPGAVA
LPVSDEGQHEAVRGIPGSDHTPPQPHPHLAQQPQPLPEPSGRRRAMAPPAPVPPSSTPLP
GAVPAAVPAPAPAPQSGTGSVPLPPELPMPMPMPTPKESGESKDSTQGRAFSVRTLGQGV
PFVPPTAAPATPVAPVATPVAAAVATAAPAVPAPSNGSGRRRKLATPPETDPPVPAAIAL
PAAAESTARPHPQSAPEAALGLAPAAPEGRAYAIGAPAEGSAEGPEPLDGPGGAIEVANR
PAPRPVDDELPPEPLDNPRRLLVWPAPDVSTQQALSDRGYRPVIVHSREEVDAQIAAFPA
ALFVDPLTGPITRTALQSLRQAAVAAEVPVLLAAGLGQATREAAYGADPAVLLKALAPRD
SEQHPSRVLLIEEHDDIAEALGATLERRGMQVARAATDTEAVALATETRPNLVVMDLMQV
RRRRAGIIDWLRANGQLNRTPLVVYTSADLDEEELPKLSSGETVLFLAERSNSTEVQARI
VDLLAKIGTN
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactcgacgccctcccc
gacggcctcgtgctcgtcaattgcaacggcacggtcgtcaacgccaacacgatcgccctc
ggcatgttcgagactcccggcaccgcactcgtcggccgtgggctgctcgacctgctgccc
gacttcgactcgcgcctcatccccggctccatgcgccgccccgaaggcaccgacgagcgc
ggccgcaccaagccgacccggatgatcgcccgccgcacggacggcggcgagttccccgtc
gaggtgaccagcgccagcctggaggacggccgcgaggcctacgactcgtacagcggctac
accggcgacgagctcctcatgctcgtcgtacgcgacctcaccggcaccctcgacaccgag
gccgaactcgcccgctcgcagcgccagaccgagatgatcctgcgcgccgcgtccgagggc
gtcgtgggcacggacaccgacggccgggtcgtcctcgtcaaccccgccgccgcacagatc
ctcggctaccgcgccggcgagctcggcggccaggagctgcacccgctgatcctcgccacc
cgcgccgacggcgagcccttcccgtacgaggagtccccgctcgccgacaccctcaagtcc
gggcgcaagcaccgcgtccgcgggcaggtgctgtgggcgaagaagggcgaccgggtgccg
gtcgacctcacgaccgctcccgtgcgggacggcgaccagctcgtcggcgccgtgatgacc
ttcaccgaccgcaggccgtacgagcagctcgccgaggagcacgccaccgagctcgccgac
cgcgccgagcggcacgcggtcgagcgggaggctcagcaggagcggtacgcctcgctggcc
gcccggcacgagcagctgaccgccgtcctcgccgagtcgctgcgcggcccgctggaggag
ctgcgcggccggctgggcgcgctcgccgccgacgacgccgggcagctgtggcccgaggcc
aaccaggtgctgcaccacctgaccgccggatacgcccggatgacggcgctcgtggacaac
gtcctggcctatcagcgcctcgacgcgggcacggaggagctcgaccggcgcgtcgcgctg
ctcgacggggtcgtgacggccggcatcgacgcggccgtcgagctgatcgggcccggccgc
gcgcagttcgccgtgcacgcgccgccgatcgaggccgaggtcgaccccgaccggctcgcg
accgcgctcgcgcacctcgtcgcggacgtcgccggcgtcgacgcgaccggcaagaaccgg
gccgccgcgcagggcgccgggccggtcgactccacgatcgtcgtcgcggccgcccaacgc
ggagacgtcgtacgcatcgaggtccgcggcccgtacgcgggcggcgacccggtccacggg
ccggtcgtgcgcgggatcgtggcggcgcacggcggtgtcgtgcagacccacgaggtaccg
gggacgagcggcggcgcgtacgtcctcgaggtcccgctcggggccggacggggcacggtc
cccgctcccgcacccgctcctgtgcccgccggctctcctggtgcggacccgcaggacgcc
ggcgtacgggaactccccgccctgcccgcgcaggccaccggtgcggaaggcgagacctcg
ggcggcggacggcgccgggcgcggcgcgcctccacggacgccttcctggagagccctgtc
gcccctgaggccgccgagccgggcggtcgccgccgtgcccgtacggaagaggccaccggc
cccgccgaactgatccccgcccagcagaacgccggggccgacggctccgccatggccgcg
ctcccggcttccgcgtccgcctccctgccctcgtcggggcccttcgcccttccctccgcc
gcgcccgccgcgcccgcagccgagcccaccgggcgacgccggggccggcccgccgagggc
tccgtggtgaccgccgccgaaggcgcgcagggacgggccgcgctgggcgccgccgtgccc
ccgcagggtgtcgccgccgccgagcacctgcacgcgcccgccggcgcgtccgcacacggc
cctgccctggcactgcccgccgtcgcctccggcggtgacgcaccggccgctccgccgagc
gggcgccgtcgacgtgcccttgccgccgcgcaggagcgtgccgcggcggccgagtccggt
cctcgcacgccgttcgcgctcccgccggccgacgcggaccgcccggagtcggccgacccg
gccgaggccgtgactgcggttcctgtgcctgcttctgtgccggttccgggcgccgtcgcg
ctgcccgtctccgacgaggggcagcacgaggccgtacgcggcatcccgggctccgaccac
acgcccccgcagccccatccgcacctcgcgcagcagcctcagccgctgcccgagccgagc
ggtcgccgccgtgccatggccccgccggcgcccgtgccgccgtcgtcgacgccgctgccg
ggtgctgtcccggcagccgtgcccgcccctgcccctgcgccgcagagcggcaccggctcc
gtaccgctgccgcccgaactgcccatgccgatgccgatgccgacgccgaaggagtcgggg
gagtcgaaggactcgacccaggggcgggcgttcagcgtgcgcaccctcgggcagggcgtt
cccttcgtcccgccgacggccgcgcccgccactccggtcgctcccgtcgcgaccccggtg
gctgccgctgtggccaccgccgcgcccgcggtcccggcgccctccaacggctccgggcgg
cggcgcaagctcgccaccccgccggagacggacccgccggtcccggcggcgatcgccctg
ccggccgccgccgagagcacggccaggccgcacccgcagtccgcacccgaggccgcgctc
gggctcgcgccggccgcccccgagggccgcgcctacgccataggggcgcccgccgagggc
tccgccgaaggtcccgagccgctggacggccccggcggcgcgatcgaggtcgccaaccgt
cccgcgccgcggcccgtcgacgacgagctgccccccgagccgctcgacaacccgcgccgg
ctgctcgtctggcccgcgcccgacgtctccacccagcaggcgctcagcgaccgcggctac
cggccggtgatcgtgcactcccgcgaggaggtcgacgcccagatcgccgccttccccgcc
gcgctcttcgtcgacccgctgaccgggcccatcacccgtacggcgctccagtcgctgcgt
caggccgccgtcgccgccgaggtgccggtgctgctcgcggccggcctgggacaggcgacc
cgggaggccgcgtacggcgccgaccccgccgtactcctcaaggcgctcgcgccccgcgac
agcgagcagcacccgtcccgcgtcctgctcatcgaggagcacgacgacatcgctgaggcg
ctcggcgccaccctggagcggcgcgggatgcaggtcgcgcgggcggccacggacaccgaa
gccgtcgcgctggccacggagacccggccgaacctcgtcgtgatggacctgatgcaggtg
cgccgccgacgggccgggatcatcgactggctgcgcgcgaacgggcagttgaaccgtacg
ccgctcgtcgtctacacctcggccgacctcgacgaggaggagctgccgaagctgtcctcc
ggcgagacggtcctcttcctcgccgagcggtcgaacagcaccgaggtccaggcccggatc
gtcgatctgctcgcgaagatcggcaccaactag
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