Streptomyces gardneri: H4W23_29045
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Entry
H4W23_29045 CDS
T07252
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgx03016
]
H4W23_29045 (truB)
Enzymes [BR:
sgx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H4W23_29045 (truB)
Transfer RNA biogenesis [BR:
sgx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H4W23_29045 (truB)
Prokaryotic type
H4W23_29045 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
DinB_2
Motif
Other DBs
NCBI-ProteinID:
QPK48292
LinkDB
All DBs
Position
6386339..6387238
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AA seq
299 aa
AA seq
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MSNAAKTPDGLVIVDKPSGFTSHDVVAKMRGIAKTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQTTITDDAEGEITASVDASKVTREQIDAGVAELTGAIMQV
PSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSSFQVYDVREATAEDGTPVVDLVVSVV
VSSGTYVRALARDLGAGLGVGGHLTALRRTRVGPYKLDAAKTLDQLQEELTVMPVAEAAE
AAFPRWDVDEKRAKLLLNGVRLEMPEYPAGPVAVFGPEGTLLALVEVQRGKAKSLAVFG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcagcaaagacgcccgacggccttgtcatcgtcgacaagccgtcgggcttc
acttcgcatgacgtcgtggccaagatgcgcgggatcgccaagacccgccgggtcggccac
gcgggcacgctcgaccccatggccacgggcgtcctcgttcttggcgtggagcgggcgacc
aagcttctcggtcacctcgcgctgaccgagaaggagtacctgggcaccatccgcctgggc
cagaccacgatcaccgacgacgccgagggcgagatcacggcgtcggtcgacgcttcgaag
gtcacccgggagcagatcgacgcgggcgtggcagagctgaccggcgccatcatgcaggtg
ccgtcgaaggtctccgcgatcaagatcgacggcaagcggtcgtacgcgcgcgtgcgcggc
ggcgaggagttcgagatcccggcccgcccggtcaccgtctcctccttccaggtgtacgac
gtccgggaagccaccgccgaggacggcacgcccgtcgtcgacctcgtcgtctcggtcgtc
gtctcctccggcacgtacgtccgcgcgctcgcccgggacctcggtgccgggctcggtgtg
ggcggtcatctgaccgcgctgcgccgcacccgcgtcggcccgtacaagctggacgcggcc
aagacgctcgaccagctccaggaggagctcacggtcatgccggtcgccgaggcggccgag
gcggcgttcccgcgctgggacgtcgacgagaagcgggccaagctgctcctgaacggtgtc
cggctggagatgccggagtacccggcgggtcccgtcgcggtcttcggacccgaggggacg
ctgctcgcgctggtcgaggtccagcgggggaaggccaagagcctcgccgtcttcggctga
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