Strigops habroptila (Kakapo): 115601722
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Entry
115601722 CDS
T08851
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
shab
Strigops habroptila (Kakapo)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
Ank_3
Ank_5
SH3_9
PDZ_6
PDZ
SH3_1
FERM_f0
2C_adapt
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
115601722
NCBI-ProteinID:
XP_030327922
LinkDB
All DBs
Position
3:complement(185059..509521)
Genome browser
AA seq
1808 aa
AA seq
DB search
MPLSPAGSKHENPESPPPEPPPERQPRAGEPGAGLREETRLDPARGPSGPRSPKLAAAAR
MEEPAPGAIVVRIGIPDLQQTKCLRLNPDVPVWVSKQRILCTLNHSLKDVLNYGLFQPAY
NGRAGKFLDEERLLREYPLNPDTPVPYLEFRYKRRVYTQTLLDDKQFAKLHTKANLKKFM
EYVQMLNVEKVCRLLEKGLDPNFHDPDTGECPLTAAVQLELSTDMIKALRNGGAHLDFRT
REGMTALHKAVRCRNHAALLTLLDLGASPDYKDSRGLTPLYHSAMVGGDPYCCELLLHDY
ARLGCVDENGWQEIHQACRYGHVQHLEHLLFYGADMTAQNASGNTALHICALYNQESCAR
VLLFRGASKEIRNYNSQTAFQVAIIAGNFELAEIIKTHKESDVVPFRETPSYTKRRRLLG
AGGLSSPRVLQRSASDNNLKAESRASYSPVPSLRSLPPQLLAQMQEAAAAAADGSVGSSG
SEPSQGRGVQLLLSPSGAGSPAARRGPRPGTEPAPHAAPAPLRGPKRKLYSAVPGRKFIV
VKSYAPQGEGEIQLNRGEAVKVLSIGEGGFWEGTVKGRTGWFPAECVEEVQMRQYDSRQE
TREDRTKRLFRHYTVGSYDNFTSHSDYIIEEKTAVLQKREHEGFGFVLRGAKAETPIEEF
TPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGNHLV
MKVVSVSRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASMRRRKGEKLDEI
LAAAEPALRADIVEADSRAATVKQRPTSRRITPAEISSLFERQGMAAHSGVLAGAEKPHV
SLRKGIPRTKSVGEDEKLAASLLDGKFPRSTSMQDTVREGHGIPPPPQTAPPPPPSPYYF
DTGPPPSFSPPPPPGRAYDTIRSSFKPSLEAKLHGLPQVLSAAEMYDQTRTSIPYPERQK
RARSMIILQDSSHLPVEPTEIPRPGPSATPPEKLKRKGRVIDNPYANMGQFNVSLFAPTK
PQRKKSPLVKQLQVEDAQERAALAITGGFSREPSPTRRSHRLSGVEYQHHAGIAQVEATG
IPFATAIAGVMKDRDRRLDERRKSTVFLSVGAIEGSPPSSDMPSLQQSRSIDERLLGSRD
VLLPSPVSALKPLISSSSSTFIHPLTGKPLDPNSPLALALAARERALSTQVPSRSPTPIH
SPDSDRAAPLFVDIQTKEPERGELESLVSPAYSPGGKGVIGTDSGTLAPTKSPWGTPSTL
RKETEARAETPGKEEKKQEDKKSMIISIVDTSQQKTAGLIMVHATSNGQDEIGLEIKEET
PAVAEACTEPAESPKAETQPSPMGKPPVSPASDKTLGQGSSEEEVEPYTVTLPPAQLSSS
DEETREELAKIGLVPPPDEFANGVLVTTPGTPVSHLATPSTPSIPAAAVAPSTTGGTPSG
KPSDAPVAPESAADSGVEEVDTRSSSDHHLETTSTISTVSSMSTLSSESGEPTDTYTSFA
DGQTFILEKPPVPPKPKLKSQLSKGPVTFRDPLLKQSSDSELISQQHAATLASASIGRPR
YLFQRRSKLWGDPMESRPIHGADDDKPTVISELSSRLQQLNKDTRSLGEEPAGSTLDPGK
KSPVVAARLFSSLGELSTISQRSSGTTYTVRPGSRYPVTRRTPSPVKPALDRTEPLSTVR
PYGLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPSPGPPLHTLHPPRPFMQK
PLHLWNKYDVGDWLESINLVEHRDKFEDHEIEGTHLPALTKEDFVELGVTRVGHRMNIER
ALKQLVDS
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagccccgccggcagcaaacatgagaacccggagtcgccgccgccagagccg
ccgccggagcgacagccccgcgccggggagccgggcgccggcctgcgggaggagacgcgg
ctcgacccggcccggggcccctccgggccccgctcccccaagctggcggcagcggcgcgc
atggaggaacccgcgcccggcgccatcgtcgtccgcatcggcatccccgacctgcagcag
acgaagtgtctgcggttgaatccggatgttcccgtatgggtttccaagcagcgcatcctc
tgcactttgaaccacagcctgaaggatgttctcaactatgggctcttccagccggcctat
aacggccgggccggaaagtttctggatgaggagcgcctgctgagggagtaccccctgaat
ccggacactcccgttccgtacttggagttccggtacaagaggcgtgtgtacacccagact
ctgctggatgacaagcagtttgccaagctccatacgaaggcaaatctgaagaagttcatg
gagtatgtgcagatgctgaatgtggagaaggtctgcaggctgctggagaagggactggac
cccaactttcatgatccggatactggagagtgtcccctgacggcggcagtgcagctggag
ctcagcactgacatgatcaaggccctgcgcaacgggggcgcgcacctggacttccgcacg
cgcgaggggatgacggcgctgcacaaagccgtgcggtgccgcaaccacgccgcgctgctg
acgctgttggacctcggtgcctccccggactacaaggacagccgggggctgacgccgctg
taccatagtgctatggtggggggggatccctactgctgcgagctcctcctgcacgactac
gcccggctcggctgtgtggatgagaacggctggcaggagatccaccaggcatgtcgctac
ggccacgttcagcacctggagcatctgctcttctatggagctgatatgactgcacagaat
gcctcaggaaacaccgctcttcatatttgtgctctctacaaccaggagagctgtgctcgg
gttctcctcttccgcggtgccagcaaagagattcgcaactacaacagccagacagcattc
caggtggccatcattgcaggcaattttgagctggctgaaatcatcaaaacccacaaagag
tctgatgttgtgcctttcagagagacgcccagctacacgaagcgacggcggctgctgggc
gcgggcggcctgtcctccccgcgcgtgctgcagcgctcggccagcgacaacaacctgaag
gccgagagccgggcgtcctactcgccggtgccgtcgctgcgcagcctcccgccgcagctg
ctggcgcagatgcaggaggcggcggcagcggccgcggatggcagcgtggggagctccggc
agcgagcccagccaaggccgaggtgtgcagctgctcctctcaccctctggagcagggtcc
ccggcggcccggcggggcccccggcccggcaccgagcccgcgccgcacgccgcgcccgcc
ccgctgcgcgggcccaagcggaagctgtacagcgccgtgcccggccgcaagttcatcgtg
gtgaagagctacgcgccgcagggcgagggcgagatccagctcaaccggggcgaagccgtc
aaggtgctgagtattggcgaaggtggcttttgggaaggaaccgtgaagggcaggactggc
tggttcccggcagaatgtgttgaggaggtgcagatgcgacagtatgattcccggcaagaa
accagagaagacagaacaaagcgcctcttccgacattatactgtgggctcttatgacaat
ttcacctctcacagtgactacatcattgaggagaagacggccgtgctgcagaagagggag
catgagggattcgggtttgtattgcgaggggccaaagctgaaaccccaattgaggagttc
accccgaccccggccttccctgcgctccagtacctggaatcagtggatgtggaaggtgtc
gcttggagagcagggcttcgcacgggggactttctgatcgaggtgaatggcgtcaacgtg
gtgaaggtggggcacaagcaggttgtctccttgatccggcaagggggcaaccacctggtg
atgaaggttgtttccgtcagccgcaagccagaatcagaagaagttgttcggaagaaggct
ccgccgcctcccaagagagcgcccagcaccaccctgacgctgcgttccaagtccatgaca
gccgagctggaggagctggcctccatgcggagaagaaaaggggagaagctggatgagatt
ctggcagctgctgagccagcgctgagggcagacatcgtcgaagcagattccagggcagcc
actgtgaagcaacgaccaacaagccggcgcatcacgccagcagaaatcagttcactcttt
gaacgccagggcatggctgcacactcgggggtccttgcgggagctgagaagccccatgtg
tcgctgcgcaaaggaattccacggacaaaatctgtaggtgaagacgagaaacttgctgct
tctttgctagatgggaagtttccccggagcacctcgatgcaagacactgttagggaagga
catgggattccaccaccacctcaaacagccccacccccacctccttctccatattacttt
gacacaggcccccctccatccttctcaccacctccacccccaggaagagcttatgatact
ataagatcaagctttaagccaagcctggaggccaaactccatggactcccgcaagtcctt
agcgcagctgagatgtatgatcagacaaggacttccattccttaccctgaaaggcaaaag
agggcccgatccatgataatcctacaggattcctctcatcttcccgtggagccaacagag
atcccccgccctggcccatctgcgactcctccagagaagctgaagaggaagggaagagtg
attgacaacccttatgccaacatgggtcagttcaacgtcagcctgttcgctcccaccaag
ccacagaggaagaagagccctctggttaagcagttacaagtggaggatgcacaggagaga
gcagcactggccatcaccggagggttttcaagggagccctctcccacccgcaggagccat
cgcctgagtggggtggaatatcagcaccatgccggcattgctcaggttgaagccacaggc
atccccttcgccactgccatcgctggagtcatgaaggacagagaccgtcgtctggatgag
aggcggaaatccactgtcttcctctcagttggggctattgagggcagcccccccagcagc
gacatgccgtccttgcagcagtccaggtctattgatgagcggttgttaggaagccgagat
gttctactgccttcccctgtctcagctttaaagccattgatcagcagctcatcctcaacg
ttcatccaccccctcacaggaaagcccttggatccgaactcgccactggcgcttgcgctg
gccgcaagggaacgagccctctcaactcaagtcccatcccggtcacccaccccaatccac
agcccagactcagaccgagcagcacccctctttgtggacatccaaaccaaagaaccagag
cggggggagttggagagcttggtgtcccctgcgtactctcctggaggcaaaggggtgatc
ggaacagactctgggactttggcccctacaaagagcccgtgggggactccatccacgctg
cggaaagaaaccgaggccagagcagaaaccccagggaaggaggagaagaaacaagaagac
aagaagtccatgattattagcatagtggatacatcacagcagaagaccgctggcctcatc
atggttcatgccacaagtaatggccaagatgagataggacttgagataaaagaggagaca
ccggctgtcgctgaagcatgcacagagccagcagagtcccccaaagcagagacgcagccc
agccccatgggaaagcctccggtcagtccagcctctgacaagacgttgggacaagggagt
tcggaggaagaagtggagccctacacggtcaccctaccgccagctcagctgtcttcaagc
gacgaagagaccagggaggagctagccaagatagggctggtgcctccaccagatgagttt
gcgaatggggtactggtcaccacccctggcacaccagtcagccatctggctacgcccagc
acgccatccataccagcggcagcagtagcaccttctaccactggcggaacaccctcaggg
aagccctctgatgcccccgtagccccagagtctgctgcagactcaggagtggaagaggtg
gacaccagaagttcaagtgaccatcatctggagaccacaagcaccatctctacagtctcc
agcatgtctacgttgtcctcagagagcggggagcctactgacacatacacttcctttgcg
gatggacaaacttttatactcgagaagccaccagtgcctccaaagccaaaactcaagtcc
cagctcagcaaggggccagttactttcagggacccacttttgaagcagtcttcggacagc
gagctcatctcccagcaacatgcggccactctggcatcagccagcattggccggccacgc
tacctctttcagagaaggtccaagctatggggggaccccatggagagcaggccaatccat
ggggctgatgatgacaagccaactgtgatcagtgagctaagttcccgactacaacaactg
aacaaggatacacgatcactgggggaggaaccagccgggtccacgttagatcccgggaag
aagtcaccggtggtcgcggcacgacttttcagtagtttaggagaactcagcaccatttcc
cagcggagctccgggaccacctacacagtccgacctggcagtcgctaccccgtaacccga
cgtacccccagccccgtgaagccggctctggatcggacagagcccctcagcaccgttcgg
ccctacggtctgacccctcccaccatcctcaaatcttccagcctctccatcccacacgag
cccaaggaggtgcgctttgtggtgaggagcgtgagcgcccggagccgctccccatccccg
tccccctcaccagggccacccctgcacaccctgcacccgcctcggcccttcatgcagaaa
cccctccatctctggaacaagtacgacgttggggactggctggaaagcatcaatttggtg
gagcaccgagacaagtttgaggaccatgaaatagagggcacgcacctgcctgccctcacc
aaggaggactttgtggagttgggggtgacccgggttgggcaccggatgaacattgagcgg
gcactcaagcagctggtagacagctga
DBGET
integrated database retrieval system