KEGG   Strigops habroptila (Kakapo): 115601960
Entry
115601960         CDS       T08851                                 
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab04142  Lysosome
shab04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:shab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115601960 (CLTC)
   04142 Lysosome
    115601960 (CLTC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shab04131]
    115601960 (CLTC)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shab04147]
    115601960 (CLTC)
Membrane trafficking [BR:shab04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    115601960 (CLTC)
Exosome [BR:shab04147]
 Exosomal proteins
  Proteins found in most exosomes
   115601960 (CLTC)
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Coatomer_WDAD TPR_1
Other DBs
NCBI-GeneID: 115601960
NCBI-ProteinID: XP_030328425
LinkDB
Position
13
AA seq 1675 aa
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQLCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq 5028 nt   +upstreamnt  +downstreamnt
atggcccagatcctgccgattcgcttccaggagcatctccagctccaaaatttgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcata
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
cccattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagctgggaagacgcttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcatacaatgacagatgatgtcaccttctggaagtggatctctctgaatactgttgcc
cttgtaacggataatgcagtctaccattggagtatggagggggagtcccagcctgtgaaa
atgtttgatcgccattctagtcttgctggctgccagatcatcaactaccgtactgatgct
aagcagaaatggctactgctaaccggcatatctgcacagcaaaatcgtgttgtgggagca
atgcagctatattctgtggatagaaaagtgtcacaaccaattgagggacatgcagctagc
ttcgcgcagttcaagatggaaggaaatgctgaagaatctactctcttctgttttgcagta
agagggcaggctgggggtaagctccatatcattgaagttggcacaccacctactgggaat
cagccatttccaaagaaagcagtggatgtcttctttcctcctgaagcacaaaatgacttt
cctgttgccatgcagatcagtgacaagcacgatgtggtgtttctcataacaaaatatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttacagctcagcatgaagcaacagctggaattattggagtgaacaga
aagggacaagtgctctcagtgtgtgtggaagaggagaatattattccttatatcacaaat
gtgctgcagaatcctgacctagctttacgaatggctgttcgcaacaacctggcaggtgct
gaggaactctttgccagaaaattcaatgcactgtttgcacaagggaactattcggaggca
gcaaaagtggcagctaatgccccaaagggaattctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccgggacagacttcccctttactccaatactttggcatt
ctgcttgaccaagggcagctgaataagtatgaatcgctggaactctgcagaccagtgctt
cagcagggacgcaaacagctcttggaaaaatggttaaaggaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagatcctacactagcacttagtgtctatctg
agagccaatgttccgaacaaagtcatccagtgttttgctgaaacgggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtagatgtcttcatggaatataatttaattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccctcggaaggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcacctcaggttgcagatgctatactg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaagct
ggcttgctacagagagcacttgaacacttcacagacttatatgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggttagtgaattattttggttccttatcggta
gaagactctctggagtgtctgcgtgctatgttgtctgctaacattcgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccatgaacagctgtcaacacagtcacttattgag
ctgtttgagtctttcaagagctttgaaggtttgttttatttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaaatatattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagttgccactcatcattgtatgtgatcgc
tttgactttgtccatgacttggtgctgtatttgtatagaaataatctccaaaaatatatt
gagatatatgtacagaaggtgaatccaagtcgtctgcctgttgttattgggggactactt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggtcaattt
tcgactgatgagcttgttgcagaggttgaaaaaagaaacaggctgaaactgcttctgccc
tggctggaagcaagaattcatgagggttgtgaggagcctgcaactcacaatgcactggcc
aaaatatacattgatagcaacaacaacccagaaagattcctgcgtgagaatccttattat
gatagtcgtgttgttggcaagtactgtgaaaagagggaccctcacctggcctgtgtggct
tatgagcgtggacagtgcgatttggaacttatcaatgtgtgcaatgagaactccctcttc
aaaagtctttcccgctacttagttcgtcgtaaggaccctgagctgtgggccagtgtactc
ctggaaagcaacccttacagaagaccactaattgaccaggttgtacagactgcactgtca
gagacacaggaccctgaggaagtctctgttactgtgaaggccttcatgactgcagatctt
ccaaatgagcttattgaactgctggagaaaatagttcttgataactctgtgttcagtgag
cacaggaatctgcagaaccttctcattcttacagctattaaggctgatcgcacccgtgtc
atggaatacatcaatcgcctggataactatgatgctccagacatagccaatatagctatt
agtaatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtgcaggtattaatagagcacattggcaacctggatcgtgcatatgaatttgctgag
cgctgcaatgagcctgctgtatggagtcagctggctaaagcacagcttcagaaggggatg
gtaaaggaagcaattgattcctatattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaagtatctccagatggca
cgcaagaaggcccgggagtcatatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctagcagagctagaggagtttatcaatggacccaacaatgcacatatccagcaa
gttggcgatcgctgttatgatgaaaagatgtatgaagcagctaagctgttgtataacaat
gtgtccaactttggccgtttagcctccactttggttcacctaggtgaataccaggcagct
gtggatggtgctcggaaagcaaacagcactcgcacatggaaagaggtctgcttcgcttgt
gttgacggaaaagagttccgcctggcccagttgtgtggactccatattgtagtgcatgca
gatgagttggaagagcttatcaactattatcaggatcgtggctactttgaagagctgata
actatgttggaagcagcacttggacttgagcgggcacacatggggatgtttacagagcta
gcaattctctactctaagttcaagccacagaagatgagggagcacttggagttgttctgg
tccagagtcaacatccccaaggttctgagagctgcagagcaagcccacctttgggctgaa
ctggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcacaaaggtggccaat
gtggagctgtattacaaggcagttcaattctatttggaatttaaacctctgttgctcaat
gatctgctgatggtgttatctcctcgacttgaccacactcgtgctgtcaccttcttcaca
aaggttaaacagctaccactggttaaaccttacctgcgctctgttcaaaatcacaacaac
aaatcagtgaatgagtccctgaacaaccttttcattattgaagaagactaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacatgagctaatagagtttcgaaggattgctgcttatctcttcaaaggaaacaatcgc
tggaaacagagtgtagagctctgtaagaaagacagactgtataaggatgcaatgcagtat
gcttcagaatccaaagatactgaattggcagaagagttgttgcagtggttcttgcaagag
aacaagagagaatgctttggtgcttgtctcttcacttgctatgatctcctaaggccagat
gttgtcttggaaacagcatggaggcacaacatcatggactttgccatgccatacttcatt
caggtcatgaaggaatacttgaccaaggtggataaactggatgcatcagagtctttgaga
aaggaagaggagcaagctacagaaacacaacctattgtttatggtcagccacagctaatg
ttgacagcaggacccagtgtcgcagttcctccacaagcaccttttggctatggctacact
gcacctccatatgggcaaccgcagcctggctttgggtacagcatgtga

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