Strigops habroptila (Kakapo): 115601960
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Entry
115601960 CDS
T08851
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04142
Lysosome
shab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115601960 (CLTC)
04142 Lysosome
115601960 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115601960 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shab04147
]
115601960 (CLTC)
Membrane trafficking [BR:
shab04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
115601960 (CLTC)
Exosome [BR:
shab04147
]
Exosomal proteins
Proteins found in most exosomes
115601960 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
115601960
NCBI-ProteinID:
XP_030328425
LinkDB
All DBs
Position
13
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQLCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgccgattcgcttccaggagcatctccagctccaaaatttgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcata
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
cccattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagctgggaagacgcttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcatacaatgacagatgatgtcaccttctggaagtggatctctctgaatactgttgcc
cttgtaacggataatgcagtctaccattggagtatggagggggagtcccagcctgtgaaa
atgtttgatcgccattctagtcttgctggctgccagatcatcaactaccgtactgatgct
aagcagaaatggctactgctaaccggcatatctgcacagcaaaatcgtgttgtgggagca
atgcagctatattctgtggatagaaaagtgtcacaaccaattgagggacatgcagctagc
ttcgcgcagttcaagatggaaggaaatgctgaagaatctactctcttctgttttgcagta
agagggcaggctgggggtaagctccatatcattgaagttggcacaccacctactgggaat
cagccatttccaaagaaagcagtggatgtcttctttcctcctgaagcacaaaatgacttt
cctgttgccatgcagatcagtgacaagcacgatgtggtgtttctcataacaaaatatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttacagctcagcatgaagcaacagctggaattattggagtgaacaga
aagggacaagtgctctcagtgtgtgtggaagaggagaatattattccttatatcacaaat
gtgctgcagaatcctgacctagctttacgaatggctgttcgcaacaacctggcaggtgct
gaggaactctttgccagaaaattcaatgcactgtttgcacaagggaactattcggaggca
gcaaaagtggcagctaatgccccaaagggaattctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccgggacagacttcccctttactccaatactttggcatt
ctgcttgaccaagggcagctgaataagtatgaatcgctggaactctgcagaccagtgctt
cagcagggacgcaaacagctcttggaaaaatggttaaaggaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagatcctacactagcacttagtgtctatctg
agagccaatgttccgaacaaagtcatccagtgttttgctgaaacgggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtagatgtcttcatggaatataatttaattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccctcggaaggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcacctcaggttgcagatgctatactg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaagct
ggcttgctacagagagcacttgaacacttcacagacttatatgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggttagtgaattattttggttccttatcggta
gaagactctctggagtgtctgcgtgctatgttgtctgctaacattcgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccatgaacagctgtcaacacagtcacttattgag
ctgtttgagtctttcaagagctttgaaggtttgttttatttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaaatatattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagttgccactcatcattgtatgtgatcgc
tttgactttgtccatgacttggtgctgtatttgtatagaaataatctccaaaaatatatt
gagatatatgtacagaaggtgaatccaagtcgtctgcctgttgttattgggggactactt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggtcaattt
tcgactgatgagcttgttgcagaggttgaaaaaagaaacaggctgaaactgcttctgccc
tggctggaagcaagaattcatgagggttgtgaggagcctgcaactcacaatgcactggcc
aaaatatacattgatagcaacaacaacccagaaagattcctgcgtgagaatccttattat
gatagtcgtgttgttggcaagtactgtgaaaagagggaccctcacctggcctgtgtggct
tatgagcgtggacagtgcgatttggaacttatcaatgtgtgcaatgagaactccctcttc
aaaagtctttcccgctacttagttcgtcgtaaggaccctgagctgtgggccagtgtactc
ctggaaagcaacccttacagaagaccactaattgaccaggttgtacagactgcactgtca
gagacacaggaccctgaggaagtctctgttactgtgaaggccttcatgactgcagatctt
ccaaatgagcttattgaactgctggagaaaatagttcttgataactctgtgttcagtgag
cacaggaatctgcagaaccttctcattcttacagctattaaggctgatcgcacccgtgtc
atggaatacatcaatcgcctggataactatgatgctccagacatagccaatatagctatt
agtaatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtgcaggtattaatagagcacattggcaacctggatcgtgcatatgaatttgctgag
cgctgcaatgagcctgctgtatggagtcagctggctaaagcacagcttcagaaggggatg
gtaaaggaagcaattgattcctatattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaagtatctccagatggca
cgcaagaaggcccgggagtcatatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctagcagagctagaggagtttatcaatggacccaacaatgcacatatccagcaa
gttggcgatcgctgttatgatgaaaagatgtatgaagcagctaagctgttgtataacaat
gtgtccaactttggccgtttagcctccactttggttcacctaggtgaataccaggcagct
gtggatggtgctcggaaagcaaacagcactcgcacatggaaagaggtctgcttcgcttgt
gttgacggaaaagagttccgcctggcccagttgtgtggactccatattgtagtgcatgca
gatgagttggaagagcttatcaactattatcaggatcgtggctactttgaagagctgata
actatgttggaagcagcacttggacttgagcgggcacacatggggatgtttacagagcta
gcaattctctactctaagttcaagccacagaagatgagggagcacttggagttgttctgg
tccagagtcaacatccccaaggttctgagagctgcagagcaagcccacctttgggctgaa
ctggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcacaaaggtggccaat
gtggagctgtattacaaggcagttcaattctatttggaatttaaacctctgttgctcaat
gatctgctgatggtgttatctcctcgacttgaccacactcgtgctgtcaccttcttcaca
aaggttaaacagctaccactggttaaaccttacctgcgctctgttcaaaatcacaacaac
aaatcagtgaatgagtccctgaacaaccttttcattattgaagaagactaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacatgagctaatagagtttcgaaggattgctgcttatctcttcaaaggaaacaatcgc
tggaaacagagtgtagagctctgtaagaaagacagactgtataaggatgcaatgcagtat
gcttcagaatccaaagatactgaattggcagaagagttgttgcagtggttcttgcaagag
aacaagagagaatgctttggtgcttgtctcttcacttgctatgatctcctaaggccagat
gttgtcttggaaacagcatggaggcacaacatcatggactttgccatgccatacttcatt
caggtcatgaaggaatacttgaccaaggtggataaactggatgcatcagagtctttgaga
aaggaagaggagcaagctacagaaacacaacctattgtttatggtcagccacagctaatg
ttgacagcaggacccagtgtcgcagttcctccacaagcaccttttggctatggctacact
gcacctccatatgggcaaccgcagcctggctttgggtacagcatgtga
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integrated database retrieval system