Strigops habroptila (Kakapo): 115603622
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Entry
115603622 CDS
T08851
Symbol
SHROOM2
Name
(RefSeq) protein Shroom2 isoform X1
KO
K18625
protein Shroom
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shab04812
]
115603622 (SHROOM2)
Cytoskeleton proteins [BR:
shab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115603622 (SHROOM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
IL7
Motif
Other DBs
NCBI-GeneID:
115603622
NCBI-ProteinID:
XP_030331480
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All DBs
Position
2:complement(49424947..49558051)
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AA seq
1759 aa
AA seq
DB search
MEDVGLRSGRERLAGGDPRLGAVLVEPGPVVVMVEQRAAEGYKLVEVQLSGGAPWGFTLK
GGREHGEPLIITKIEDGSKAAAVDKLLAGDEIVGINDVGLSGFRQEAICLVKGSHKTLKL
VVKRRNDLACRPHSWHATKFTESQPETATSHLSSSNACASWHSRYHASCSSHDLSNSWDQ
SSLHRTSDQFSSLGSMDSWDHTPQVAQYGRLSSARSNSSIDHLGSQSKRDSAYGSFSTSS
STPDHTLSNADTSSTENMLYKVGHWETSKHGNKSGQFLSDSSGIEDKPGYLPAPVQYENN
RSPRIEEHSDAKLTSSGRSSFGPVWYVPDKKKSSSPPPPPPPLRSDSFAATKGHEKAHGP
VYSEGASTQHFTALNRSQPRSDWSLETVEQQRRPSRACDRRVSSSNYKSDLNSEHTFSST
GERYSSNAGTVNKLQSSLSSTDVRFAQPTYSYHHQHQYSDESTFFHNARILAAPKDQQHY
LSYSGIQELPTDHFHGYSPNPASHLNASSSLNSSAEQKMDNTGQSRYYCVTVKQPAQGSS
KPQQLKDDSWKPGVGTDPSLGSQENLAVVTMVQKPKYYLPQQSVESSLKGCESSSHHPLD
REGDARCAVVEEARKPNHTEKSGQKKNFENSSEESETRYGQQEYVKGCVLTTENRSAQKD
FRWGKDESSKISPQKTPMLHSLAQEGKKQSNNSSEVVTERQAPFDTHLSKQARRSDRFAT
TLRNEIQMRRAKLQKSRSTATLVGSPETEECKETWKPDSAENVTASPDTNFTTTYKDHLK
EAQARVLRATSFKRRDLEPSPAEYLPRSPERKTGSYNSSLSLVSEDVSGFLEATQGKPNP
TGSGTHHVSRIGARKRFTTEQKMKSYSEPEKMNEVGITEGECRAHCCPNPSEEALGSFAD
RWKFFEETSKPAQRRPPQKPAPYSLAEGQPERPDRKVHSGQEGEDSWYERRGRAASLGLE
TAHASKDNVHHSSSSKAADRIVKSEQPQRLGTFAEYQASWKEQRKPIEPRNSGRYHSADN
ILDAGHEQHEKPQYTHERSRSSPSTDFYKQEVSVEVRRQAEDLKEDGERIFSKVNNLDER
NCTVRQADTGALRENPREKRDQLDQNLGLKWKASVRPLHAQEPAVLPHESRGRSGTLPSD
YRYSQENANEKSRDRSLPHLPCSEPQTLNENHSSLSQGKGDENHRVEPVLLNKKRGPAPQ
RPPPPKRDKYRRPDNPAPSLGTSFESLLVAPSRPFPSSSPSSAEVFASHSSLCQSPATFN
GKLKSANPQQLRQASSTENVCQHLEEKTHLKSESVLPFKYRYLQKPGMETSRSPSPQFAP
QKLTDKPPVSVQDENPARIERVIDNNTTVKMVPIKIVHSESSAEKESRQSLVSTMEPPAL
PSGLEKDQIKTLSTSEQSYSRFCAYTRQGVEPEPEARTKPVDPQPAEEPGSNLKDSSAAT
PAVSYVKAKEKTFEDWKSEELAREIVGRDKSLADILDPNVKIKTTMDLMVGIFPKDEHLL
EEAQQRRKLLPKVPSPKISEEKKEEQSVPSAISLTTSSTYYSTSAPKAELLIKMKDMQEQ
QQQSEEDSEDELDHDLSEKKQELIDSISRKLQVLREARETLLEDIQANNILGEEVEAIVK
EVCKPNEFDKFKMFIGDLDKVVNLLLSLSGRLARVENALNNLDENTSAEERRTLVEKQKL
LTQQHEDAKELKENLDRRERIVFDILANYLSEENLADYEHFVKMKSALIIEQRELEDKIK
LGEEQLKCLTDSLQPERLK
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtggggctgcggagcggacgggagcggctggctggcggcgacccgcggctc
ggcgccgtgctggtggagccggggccggtggtggtgatggtggagcagcgggcagcggag
ggctacaagctggtggaggtgcagctgagcggcggggctccctggggcttcactctgaag
ggcggacgggagcacggggaacccctcatcatcaccaagattgaagatggaagcaaagct
gcagctgtggacaagttactggctggggatgaaattgttggcatcaatgatgtgggcctc
tctggcttccgacaagaagcaatctgcctggtgaaaggttcacacaagacactgaagctt
gtagtaaaaaggagaaatgacctagcctgcaggcctcactcctggcacgcaaccaaattt
acagaaagtcaacccgagacagccacgtcacacctttcctcctccaatgcctgcgcttcc
tggcactcgcgctaccatgcaagttgttcttctcatgacctgtcaaactcatgggatcag
tcaagtctacatcgcacttctgaccagttcagcagtttgggaagtatggacagctgggac
cacactccacaagtagcccagtacggaagactttcttctgcaaggtctaatagtagcatt
gatcatctagggagccaaagtaagcgggattcagcctacgggtctttctccacaagttct
agcacccctgaccacactctatccaacgcagacacttcttcaacagagaacatgctatat
aaagtaggccactgggagacttctaagcatggaaacaagtcaggccagttcttgagtgac
agcagtggaatagaggacaaacctgggtatttgccagctcctgtccaatatgaaaacaat
agaagtcctagaatagaggaacactccgatgccaagctcaccagctctggaagatccagt
tttggacctgtgtggtatgttcctgataagaagaagtcttcatctcctcccccgccacct
ccaccgcttcgtagtgacagctttgctgctacgaaaggccatgagaaagcccatggccct
gtgtactcagagggtgccagcacgcagcactttacagccctgaatcgatctcagcccagg
agtgactggagcttggaaactgtggagcagcagcggcggccctccagggcatgtgacagg
agggtcagcagctcaaattataaatccgatctcaattcagaacacactttttcttcaact
ggtgaaaggtacagtagtaacgcaggaactgtgaacaaactgcagtcgtccttgtccagc
actgatgttcggtttgcacagcctacctacagttaccaccaccagcaccagtacagtgat
gaaagcactttttttcacaatgcaagaatcttagctgcgcctaaagatcagcaacattat
ctgtcctatagtggcattcaggagttacctacagatcattttcatggctacagtccaaac
ccagccagtcacctcaacgcttcctcttctttgaacagttctgctgaacagaagatggac
aacactggacagagtcgctattactgcgtgacggtaaaacagcctgctcagggaagctca
aagccacaacaactcaaggatgacagctggaaacctggagtggggactgatccatctctc
ggatctcaagaaaatcttgcagttgtcacaatggtccaaaaaccaaaatactatctacct
caacaatctgttgaatcttcactgaaagggtgtgagagcagcagtcatcacccattggac
agagagggggatgctaggtgtgctgtagtagaagaggctagaaaacccaatcacactgaa
aagtctggacaaaagaaaaactttgagaacagctctgaggaaagtgaaaccaggtatggt
caacaggagtatgtaaagggctgtgtccttaccactgaaaacagatctgctcagaaagat
tttaggtgggggaaagatgagagtagcaagatttctcctcagaagaccccaatgctgcac
tctttagctcaggaagggaaaaagcagtctaacaacagctcagaagtggtaacagagcgg
caggccccatttgacactcacttgtctaaacaggcacgaagaagtgatcgttttgcaaca
accctgagaaacgagatccaaatgagaagagcaaagctgcagaagagtagaagcactgct
acgttagtagggtcacctgaaacagaggagtgcaaagagacctggaagccagattcagca
gaaaatgtcactgcctccccagacactaactttaccaccacctacaaagatcacctcaag
gaagcccaggccagggttctgagggcgacatccttcaaacggcgggacttggagcccagc
cctgctgaatatctccccaggtcacccgagcggaaaactggtagttacaactcttcgtta
tctttggtttctgaagatgtgtctggattccttgaggctacacaaggtaaaccgaacccc
acagggagcggcactcatcacgtttctcgcatcggagccaggaagaggttcacaacagag
caaaaaatgaagtcttactctgaaccagagaagatgaatgaggtggggattacagagggt
gagtgccgtgctcactgctgtccaaatccatctgaagaagccctaggctcatttgcagac
aggtggaaattttttgaagaaacaagtaagcctgcacaaaggagaccaccacagaaacca
gctccctacagtctagctgagggacagcctgagaggccagataggaaagttcacagtgga
caggagggagaggactcatggtatgagagaagaggtcgggcagcctctcttggactagaa
actgcacatgcttcaaaagataacgtccaccatagtagcagcagtaaggctgctgatagg
attgtgaaatctgagcagccgcagcgcctgggaacctttgcagagtatcaggcgtcatgg
aaggagcagcggaagcctatagagccgcggaactcagggaggtaccattcagccgataat
atccttgatgcaggccacgaacaacatgagaagccccagtacacccacgagaggtctaga
tcatccccctctactgatttctacaaacaggaagtctcagttgaagtaaggaggcaagca
gaggatttaaaggaggatggggagcgtattttctctaaagttaacaatctggatgaaagg
aactgcactgtaaggcaagctgacacaggggccttgcgggaaaacccacgggagaagagg
gatcagctggaccagaatttaggcctcaagtggaaagcatctgtcagacctttgcatgcg
caagagcctgcggttctgcctcacgagagtcgggggaggtctgggacattgcctagtgat
taccgatactctcaggaaaacgcgaacgagaagagcagggatcgtagcctgcctcatctc
ccctgctctgagccacagaccttgaacgagaaccactcctctctgtcccagggcaaagga
gacgaaaaccatagggtagagccggtgctgctgaacaagaagcgtggacctgctcctcag
aggccaccaccacctaaaagagataaatacaggcgaccagataatcctgcaccgtcactc
ggcacatcttttgaatctctgctagtagcgccgagccggccctttccatcctcgtccccc
agctccgccgaagtatttgccagccactcctctctctgtcagagtcctgcaactttcaat
ggaaaattgaagagtgctaatccacagcagctccggcaagcgtcatccacagagaatgtt
tgtcagcacttagaagaaaaaacgcaccttaagtccgagtctgtattacctttcaagtat
cggtatcttcaaaaacctggcatggagacatcaaggtccccttctcctcagtttgcacca
cagaagctcactgataaacctcctgtgtctgtacaggatgagaacccagccagaattgaa
agggttatagacaacaatactacggtgaaaatggttcccatcaagatagttcattctgag
agcagcgcagagaaggagagtcggcaaagtcttgtcagtaccatggagcctcctgcttta
cccagtggtttggaaaaggaccaaattaaaacactcagcacttctgagcaatcctattca
cgattctgtgcttacaccaggcaaggtgtagagccagagccagaagccagaaccaaacca
gttgaccctcaaccagctgaagaacctgggagcaacttgaaggacagcagtgctgccaca
ccagcagtcagctatgtaaaggccaaagagaagacctttgaagactggaagtcagaggag
ctagccagagagattgtgggaagagataaatctctagcagacatactagatcctaatgtg
aaaataaaaacaacaatggatctgatggttggtatattccctaaagatgaacacctccta
gaagaagctcaacagcgcaggaagctcctgccaaaagttccttctccaaaaatttcagag
gagaagaaagaggagcagagcgtaccgtctgccatctccctgacgaccagttctacttac
tacagcacatctgcaccaaaggcagagctgctgattaaaatgaaggacatgcaggagcag
cagcagcagagtgaggaagattctgaagatgagctggatcatgacttgtcagaaaagaag
caagaacttattgacagcattagtaggaagctgcaggtgctgagggaagcacgggagaca
cttctggaagacatccaagcaaacaatatactgggggaggaggtagaggccattgtgaaa
gaagtctgcaaaccaaatgagttcgacaaattcaagatgtttattggcgaccttgacaaa
gtggtcaacctcctgctgtcactgtcaggtcgtctggcccgggtggaaaatgccctcaat
aacctggatgaaaatacctctgcggaagaacggcggacactggtagagaagcagaagctg
ctgacccagcaacatgaagatgcaaaggaactgaaggagaacctggatcgtcgagagcgc
attgtctttgacattttggcaaactacttgagtgaggagaacttagcagactatgagcac
tttgtaaaaatgaagtcagccctcatcattgagcagcgagagcttgaggacaagatcaag
ctgggggaagagcagctgaagtgtctgactgatagcctccaacctgaacggctcaaataa
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integrated database retrieval system
