Strigops habroptila (Kakapo): 115603714
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Entry
115603714 CDS
T08851
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115603714 (AFF3)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115603714 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
115603714
NCBI-ProteinID:
XP_030331729
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All DBs
Position
2:complement(57586624..57916779)
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AA seq
1241 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGAFHTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQMPLPKPDEHLIADSRPLP
PPPISNTTSSTPAVLSAQQSKSATMGWQKAGHNAPSDGQQRASKHGHRSLESHKGDFKLV
NQKSSLDKLKRYASSPTSSSSTSNASQQSSLRATIGDNVSRLQQPAKLNCSSEGGAQAQE
RPAKHGGSHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKLPAETTKSYR
GVPSNKPDSARTKSKIAKFSIPKQEEDSGAGDNSCVEEILREMTHSWPAPLSAIHTPGKA
EQSKFPFPNKESQQGSTGHSNTRKSDVEPKSPEKSATHTSMLEDDLKLSSDEEESDQQAA
QRSALRVLSDSLVVPQSNARASGLSSKGSSSSSSSESETSSESDSESESSSSESDGSKPS
HYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILTHHDGPALEAHPYYSRVKAEQPKSEKTP
ATGPAEHRSGEVRATTTATATATATGDGPRPRTANKAPGSKGSRQKSPPAADGGPPRRAA
GKKAPRRAERTSAGDGPQCPSAEEPPGSHSFPESTAGEAPRARPGGSTNGSGCRAGHRRE
PRPAATGEKRRARGPGKTAPKSKEFIETESSSSSSSSDSGSESEREERPLPKAPVAAGSE
PRTKDAGTGAASKPHGGCSAFGSINARTSSEIAKELEDQFYTLVPFGRNELLSPLKDSDE
VKSLWVNIDLALLSRIPERLPEEPLAMSAGANQAASLPQGSSADPPAEKGLPKSRRKRKC
ENEEDCRDIKKAHLERESSSRLAASAHSINTANHCNMNENSLAIPINKNEKMLRSPVSPL
SDASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKSEIQSQPHPGDFNKAVHINSENAVL
CNKPQSQTEPWSPLSSTPRDCRRTKLTFDDMPRNADYFMQEAKRKKHKADAMVEKFGKAL
NYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHSGPNATPEDKQLAA
LCYRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSPWGASGKSTGTPSPMSP
SPSPVSSVGSQGSTGAPSPSPIVSIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKEN
RDFFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctccttcaggagtgggacctggactctctgtgtgtctat
gagccagatagaaacgtgctgcgaaggaaagaatgggaaaggagaaatcaggaggcccag
caggaggatggcgcatttcacacaagttactccctcttcagtgaaccatacaagactaac
aagggggatgagctctcaaatcgcatccagaatacactgggcaactatgatgaaatgaaa
gacttgttaactgaccgatcaaaccagagccaccttgttggggttccaaaacctggggtt
cctcagatgcctctccccaagcctgatgaacatcttattgcagactcaagaccgctgcct
cctcctccgatttccaacactacttcttccacaccagcagtcctatctgcccagcaaagc
aaaagcgccacaatgggttggcagaaggctgggcacaatgccccttcagatggccagcag
agagcaagcaagcatggacaccggtcgctggagtcacacaagggtgacttcaaacttgtg
aaccaaaaatccagtctggataaactaaaacgctatgcatcgagtcccacttcctcttcc
tccacctccaatgcttcccagcaaagctcactgagggccacaataggagacaatgtcagc
aggctgcagcagccagcaaagctcaattgtagctcagaaggaggagctcaagcgcaagag
aggccagcaaagcatggtggcagccactgcgtccaaaatttcccaccctctcttgcttcg
aagcccagtctggttcagcagaaaccaacagcttatgtaaggccaatggacggtcaagat
caggctcctgatgagtctccaaagctgaagttaccagcagagacaaccaagtcatacagg
ggagtgccttctaacaagcctgattcagccaggaccaagtcaaagatagccaagttcagc
attcctaagcaggaagaggacagtggagctggggataacagctgcgttgaagaaatattg
cgggagatgacccattcatggcctgctccactgtcagctattcacacaccaggaaaggca
gaacaaagcaagtttcccttcccgaataaggagtcacaacagggatctacaggacacagc
aatacaaggaaaagtgatgtagagccaaagagtccagagaaaagcgcaacccatacatca
atgctagaagatgacctcaagttaagcagcgatgaagaagagagtgaccagcaggcagca
cagagatctgctctccgcgttctatctgacagcctggtggtgccacagtccaacgcccga
gcctcgggactctccagcaaggggtcaagcagcagcagctccagtgaatccgagaccagc
tcagagtctgattcagagagcgaaagcagctccagcgagagtgacggcagcaagccttcc
cattactccagcccagagcccgagccaccctcctccaacaagtggcagctggacaagtgg
ctgaataaagtcaccccacacaaagcacccatcctgacccaccacgatggcccggcgctg
gaggcccatccttactacagccgtgtgaaggcagagcagccgaaaagcgagaagacccca
gcgaccggcccagccgagcaccgcagcggggaggtccgtgccaccaccaccgccaccgcc
accgccaccgccaccggggacggaccgcggcctaggaccgccaacaaagcaccgggcagc
aagggcagccggcaaaagtcaccccccgctgccgacggcgggcctccgaggcgggcggca
gggaagaaggcaccgcggcgggccgagaggacctctgccggggacggcccccagtgcccc
agcgcggaggagccacccgggagccacagctttccggagagcactgctggtgaggcgccg
agggcccggcccggcggcagcaccaacggcagtggctgcagagcggggcaccgccgggag
ccccgcccggctgcaaccggcgagaagcgccgggcccgcgggccaggcaaaacggcgccc
aagtccaaggagtttatcgagaccgagtcttcgtcctcatcgtcctcctccgactcgggc
tccgagtcggagcgggaggagcgcccactgcccaaggcgcccgtggcggccgggtccgag
ccgcgcaccaaggacgcagggaccggcgccgccagcaaaccccacggtggctgcagtgcc
tttggctccattaatgccaggactagtagtgaaatagcaaaggagctggaggaccagttt
tacaccctggttcctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgag
gtaaagtcactgtgggtcaacattgacttggctcttttgtccaggattccagagcgtttg
cctgaagagccgctggccatgagcgccggagcaaaccaggcggccagcctcccgcagggt
agtagtgctgacccccccgcagagaagggtttaccgaaatctagaaggaaacgcaagtgt
gagaatgaggaagactgcagagacatcaagaaggctcacttagagcgagagagttcttca
cgattagctgcctctgcccacagcatcaacacagcaaatcactgcaatatgaatgaaaat
agcttggcaataccaataaataaaaatgagaaaatgcttcggtcacccgtctctcccctc
tccgatgcatcaaaacacaaatactccaacgatgatttaacttcctccagcagacctaat
ggcagcagtctattaccttccatctcctccagcaaaaagcataagagtgaaatccagtcg
cagccacatcctggagacttcaataaagcagttcacatcaattcagaaaatgccgttctc
tgcaataagccacagtctcaaacagagccttggtcacctctgtccagcacacccagggac
tgcagaaggacaaagcttacctttgatgatatgccacgcaatgcagattactttatgcag
gaagctaaacggaagaagcataaagcagatgcaatggtggaaaagtttggaaaggcattg
aattatgcagaagcggcactatcatttattgagtgtggaaatgcaatggaacaaggccca
atggaatctaaatccccttatacaatgtattcagaaacagttgaactcatcaggtatgca
gtgagactaaaaacccactcaggccccaatgccacgccagaagacaaacagctggcagca
ttatgttaccgctgcctggcccttctgtactggaggatgttccgactcaagagagaccat
gcggtcaagtattcgaaagcgcttattgagtatttcaagaattcatcaaaagctgcccag
aacccatctccttggggtgccagtggaaagagcacaggaacaccatcacccatgtcccct
agcccttctccagtcagctctgtaggatcccaggggagcaccggggccccctccccatct
cctattgtcagcatcccgcagcgcattcatcaaatggctgccaaccatgtcagcatcacc
aacagcatcctgcacagctatgattactgggagatggctgacaacctggccaaggaaaac
agagatttttttaacgacttggatgcgttgatgggacctatcaccttgcacagcagtatg
gagcatttagttcagtacactcaacaaggacttcactgggtgcggaatagcgctcacttg
tcataa
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