Strigops habroptila (Kakapo): 115607743
Help
Entry
115607743 CDS
T08851
Symbol
CPSF7
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 7
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03015
mRNA surveillance pathway
shab03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115607743 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115607743 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115607743 (CPSF7)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
115607743 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
115607743
NCBI-ProteinID:
XP_030341242
LinkDB
All DBs
Position
4:1912162..1924101
Genome browser
AA seq
547 aa
AA seq
DB search
MSPRCPSTLSWGRSITAGGPTLWYSVAAVEDLPPPVEAGRKGGRGRGQDRKGRGVARRRW
RWRVSSRPLPVPAPGLLLLLPPLEVCLRGVDLIDIYADEEFNQDSEFSNADQMDLYDDVL
AASSQPPESRSSSSEPPPEIRQEPSPKPNSKAPAILYTYSGLRNKRAAVYVGSFSWWTTD
QQLIQTIRSVGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKILNGDKV
EVRLATRQNLSQFEAQARKRVPPRAHSRDSVDSVDGRATPTENALPTARVEKPPSVLPFF
NRPPTALPLMGLPPPPMPPPPPLSSGFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAV
PPALHLNPAFFPPPNAALGPPPDTYGKAMAPYNHSSRELGPPAPPVSEGEFEEIMNRNRA
ISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVLLSSLKDCLHGIEAK
SYSTGASSSSSRKRHRSRERSPSRSRESSRRHRDLLHSEDRHEDYFQERNREHERHRDRD
RERDRHH
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgcggtgcccttctaccctctcttggggccgctctataacagcgggcggacca
actctatggtactcggtagcggcggtggaggacctccccccaccagtagaggcggggcgg
aagggcgggagggggcgtggccaggaccggaaggggcgtggcgtggcgcggcggcgctgg
cggtggcgtgtctcctcccgtcctctgccggtcccagcccccgggctcctgctactgctc
ccgcctctggaagtatgtctgaggggggtggatctgatcgatatctacgccgacgaggag
ttcaaccaggactctgagttcagtaatgctgatcagatggacctgtacgacgacgtgttg
gccgcgagctcccagccccccgaaagccgcagcagcagctccgagcccccccccgagatc
cgccaggagccatcccccaaacccaacagcaaggccccggccatcctgtacacctacagc
gggctgcgcaacaagagagctgctgtctacgtgggcagcttctcctggtggacaactgac
cagcagctgatccaaaccatccgctcagtcggtgtctacgacgtggtggagctgaagttc
gcagagaaccgagccaatggccagtccaaagggtatgcagaggtggtggttgcctctgag
aactcagtgcacaagctcctggagctcctgcctggcaagatcctcaacggggacaaggtg
gaggtgaggctggccacccggcagaacctctcccagttcgaggcccaggctcgcaaacgt
gtgcctcccagggcccattcccgggattccgtggactccgtggatggccgcgccacaccg
acagagaatgctttgcccacagcccgtgtggagaaacccccctcggtcctgcccttcttc
aaccggccccccaccgccctgccccttatggggctgccccctccaccaatgccaccacca
ccccctttgtcctccggcttcggtgtccccccgccaccccccggcatccactaccagcat
ctcatgcccccaccgcctcgactgcccccacaccttgctgtgccccccccgggggctgtc
ccccctgccctgcacctcaaccctgccttcttccccccacccaacgcggcgctgggtccc
ccaccggacacctacggcaaggccatggctccctataaccacagcagccgggagctgggc
ccaccagcccccccagtgagtgaaggggagtttgaggagatcatgaacaggaaccgggcc
atctccagcagcgccatctccaaggcggtgtccggcgccagcgcaggtgactacagcgac
gccatcgagaccctcctcacggccatcgccgtcatcaaacagtcccgtgtcgccaacgac
gagcggtgccgcgtcctcctctcgtccctcaaagactgtctgcacggcatcgaggccaag
tcctacagcaccggcgccagcagcagctcctccaggaaaagacaccgatcccgggagcgc
tctcccagccggtcccgggaaagcagccggcggcaccgggacctgctccacagcgaggac
cggcacgaggactacttccaggagcggaaccgggagcacgagcggcatcgggacagggac
agagagagggaccggcaccactga
DBGET
integrated database retrieval system
