Strigops habroptila (Kakapo): 115610380
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Entry
115610380 CDS
T08851
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115610380 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115610380 (SEC24B)
Membrane trafficking [BR:
shab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115610380 (SEC24B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
115610380
NCBI-ProteinID:
XP_030347684
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All DBs
Position
7:54821473..54868660
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AA seq
1234 aa
AA seq
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MSAPAGLPPRPAGAAAAVYSGGPGGSREAASPRSGAPRYQNGPVQSHMQFPSGYDSHPPN
YSAPSGHYSQVPNKAAASHLDNQYRANYYPTYYSAPAQNVMTPSVGTNVLNTQESQQLYN
STPPHTVGSAEGPIQGAISSASYLHTSAQQSYAAFGNHYSTSVSSSVTSQGFPLNSDHYT
MHVAPSAVYPNVSYPPVAAGSVYGQAFTSQSLPAPGQFKETNTFSSQSTSVPRSLQQHVP
VGYSTTLSTTSSAQSVQDNLSRNLTGSVSKVNNQINTGGVDSSQPAHSVSQSVLFTKPGA
GTSASSPVISSVRTPAPSLSSQPQSSPSVTQSPEPALQEGMQYGGYVNNQASSAPAPLSS
SSDDEEEDEEDEEAAIDSSSTTSSASPVLNNYDALEGGGYPETRSVTSSPVPTPSAPQTP
KASKPFGYGYPTLQPGYQNAAPPTPVQPSNPGHHPGFQHYTQQYPSVNQLSSSIGGLSLQ
HSQQPESLRPVNLTQDRNILPVSSVPAPVPNLNSDLRKLNCSPDSFRCTLTNIPQTQALL
NKAKLPLGLLLHPFRDLTQLPVITSSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVND
VPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAG
YLTIVCQSLLENLDKLPGDSRTRIGFITFDSTVQFYNLQEGLSQPQMLIVSDIDDIFLPT
PDSLLVNLHESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRISVFQTQ
LPSLGAGLLHSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDL
ASLACMSKYSAGCIYYYPSFHRSHNPAQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSI
HTFHGNFFVRSTDLLSLANVNPDAGFAVQMSIEESLTDTSLVCFQTALLYTSSKGERRIR
VHTLCLPVVSSLADVYAGADVQAVVCLLANMAVDRSVSSSLSDARDALVNAVVDSLAAYM
STVSNLQQSMLIAPNSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQMKSQPLVHLM
KMIHPNLYRIDKLIDESTIHVNDRVVPQPPLQKLSAEKLTREGAFLMDCGSIFYIWIGKN
CDNNFIKDVLGYPNYASVPQKMTQLPEVDALSSERTRSFISWLRDSRPLSPVLHVIKDEN
PAKTDFFQHLIEDRTEAAFSYYEFLLNIQQQICK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcccgccgggctgccgccgcggcccgccggtgccgccgccgccgtttactcg
ggtgggcccggcggctcccgggaggccgcgtctccccggagcggcgcgcctcgctaccag
aacggtcctgtgcagagtcacatgcagttcccctctggctatgactcgcatcctccaaac
tatagtgcgccttcaggacactattcccaagtgcccaataaagctgctgcttcacatttg
gataatcagtatagagctaattactaccctacttactattcagcaccagcacaaaatgtt
atgacgccttctgtgggtaccaatgtgttgaatacacaggaatcgcagcagctgtacaac
agtactcctccccatacagtggggtcagctgagggacctattcaaggagcaatatcatct
gcatcctacttgcatacaagtgctcagcagtcatatgcagcatttggtaatcactacagc
acttctgtgagctcttcagttacatctcagggatttccccttaattctgatcactacacc
atgcacgtggctcctagtgccgtgtatcctaatgtttcctatcctcctgtggctgctggc
agtgtgtacgggcaggcgtttacctctcagagcctacctgctcctggacagttcaaagag
acaaatacgttttctagtcagagtacatcagtacctcgttcacttcaacagcatgttccc
gtgggatatagtacgacattatcaactacttcatctgctcagtctgttcaagacaacctc
agcaggaatctcactggatcagtttctaaagtaaacaaccaaataaatacaggtggtgtt
gattcttcacagcctgcgcattctgtgagccagagcgttctgttcaccaagcctggggct
ggaacatctgcttcctctcctgtgatctcatcagtaaggacacctgctccaagcctttct
tcacagccacagtcttcaccttctgttacacagtcaccagagccggcccttcaggaaggc
atgcagtatggtggatatgttaataatcaagctagctctgcaccagctcccttgtcatca
agttcagatgatgaggaagaggatgaggaggatgaggaagcagcaattgatagttcctct
actacaagcagtgcctctcctgttctgaataattacgatgccctggaaggaggtggctat
ccagagacacgttctgtgaccagcagcccagttcctactccctcagccccacaaacacca
aaagcttctaagccttttggttatggatatccaacactgcagcctggctaccaaaatgca
gcaccacctactcctgtgcagcccagtaatccaggacaccatcctgggtttcagcattat
acacagcaatatccaagtgtgaaccagctgtcctcttccataggagggttaagtctacag
catagtcagcagccagaaagcttgagaccagtaaaccttacacaagatagaaatattttg
cctgtatcttcagttccagcacctgtgcctaacttgaattctgatcttaggaaattaaac
tgcagtccagattcatttcgatgtacattgacaaatattccacagacacaggctttgtta
aacaaagctaaacttcctttaggtttgttgctacatcccttcagagacctaacgcaatta
ccagtaataacatcaagtacaatagtgagatgcagatcctgcaggacatatatcaaccct
tttgtttctttcattgatcaaaggaggtggaaatgcaatctgtgctatagagttaatgat
gttcctgaagaatttatgtataatcctctgacacgatcttatggagagcctcacaaacgg
ccagaggtccaaaattctacagtggaattcattgcttcctcagactatatgcttcgtcct
cctcagcctgcggtatatttatttgttttagatgtgtctcataatgcagtggaggctgga
tatttgacaatagtctgccagtcattgctggaaaacctagacaagctgcctggagactcg
aggacaaggatagggttcataacatttgacagcactgttcagttttacaacttgcaagaa
ggtttatcgcagcctcagatgctgattgtctcagatatcgatgatattttcctacctaca
ccagatagtttacttgtaaatctccatgaaagcaaagagctcataaaagatctgttgaat
gcattaccaaatatgttcaccaatacaagagaaacacacagtgcgctgggccccgctctt
caggctgcatttaaattgatgtctccaacgggtggtcggatatctgtgtttcagactcag
ttaccatctttgggagcagggcttttgcattccagagaagatcccaatcaaaggtcaagc
acaaaggtggtccagcatcttggtccagcaacggatttttataagaagttggcactggac
tgttcaggccagcagactgctgtggatttatttctcttaagttcacaatattctgatcta
gcttctcttgcttgcatgtccaagtattctgctgggtgcatctattactatccatctttc
catcgtagccataatcctgctcaggccgaaaagttgcaaaaagaccttaaaagatacctt
acaagaaagattggatttgaagcagttatgcgcataagatgcacaaaaggtctttcaata
cacacttttcatgggaacttttttgtacgatctactgatttattgtcccttgccaatgtc
aatcctgatgctggatttgcagtacaaatgtccattgaggaaagtctgactgacacatct
ttggtttgttttcaaacagctcttttgtatacttccagcaaaggtgaacgtcgaattcga
gtgcacacactttgcttacctgtagtaagttcactggctgatgtatatgcaggagcagat
gtacaagcagttgtatgtctcttagcaaacatggctgtggatcgctcagtttcatctagt
ctttcagatgcaagagatgccttagttaatgccgtggtagattccttggcagcatatatg
tcaactgtctcgaatctgcagcagtccatgctaatagcaccaaattctctcaagctattt
ccactgtatgttttggcccttctcaaacagaaagcatttagaacaggcacaagtacacgc
ttggatgatcgtgtatatgcaatgtgccagatgaagagccagcctcttgttcatttgatg
aaaatgatacatcccaacttgtacaggatagacaagttgattgatgagagtacaatacac
gtaaatgacagagttgttccacagccacctcttcagaagctgtctgcagagaagttgaca
agagaaggagcttttctaatggattgtggctcaattttttacatttggattggaaaaaac
tgtgataacaacttcataaaagatgtccttggatacccaaactatgcatcagtaccacag
aaaatgacacagcttcctgaagtagatgcactttcttcagaaaggacacgatcttttata
tcttggcttagagacagtagacctttaagtccagttcttcatgtaataaaagatgagaac
cctgccaaaacagatttttttcagcatttaattgaggatcggacagaagcagctttctca
tattatgaattcttacttaatattcaacagcagatctgtaagtga
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