Strigops habroptila (Kakapo): 115611015
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Entry
115611015 CDS
T08851
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shab01009
]
115611015 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115611015 (SH3RF1)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115611015 (SH3RF1)
Protein phosphatases and associated proteins [BR:
shab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115611015 (SH3RF1)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115611015 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
Coilin_N
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
115611015
NCBI-ProteinID:
XP_030349164
LinkDB
All DBs
Position
7:40024410..40104392
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AA seq
872 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVDCSV
DELPSNILLVRLLDGIKQRPRKPSTGGGTGSANALRVPINTVANCGSKDLQSSQVGQQQR
VQARSPPVRGVPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIHGF
FPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGML
ADKIGIFPISYVEFNTAAKQLIELDKPSGSAVDSGEGTSGAAHNNSTQKHTDTKKNTKKR
HSFTSLTMSNKSSQSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHIGTT
GLIVTPPPSSPVTTGPSFTFPSEVTYQAALGNMNPPLPPPPLLSAAIIASASSGPQSAGV
IQRPTSGPTDQMAHLRPQTRPNVYIAIYPYTPRKDDELELRKGEMFLVFERCQDGWFKGT
SMHTSKIGVFPGNYVAPVTRTVTSTSQTKVPMSTAGQTGRVVTMVSPSTTGGTSQKLQGN
GVAVNSSTVPTAVVSAAHIQTSPQAKVLMHVTGQMTVNQARNAVRTVAAHSQERPTAAVT
PIQAQSPTCLIPAAVIIPHHSVASQQLQPPANSAAYVTAVNVNRSTIPLACAAGSLNSPN
IAASSLEEDVSGRTVNTHAGAPASPESALAAGGNAAVSKADKDGKKEKKGLLKLLSGAST
KRKPRLSPPASPTLEAEQAAAELALQGAVGPELPSASGHSKAGSCPTDSEVSGLVQETLH
RKTSSLDSSIPIAPPPRQPCSSLGPVLSESRPLVCERYRVVVSYPPQSEAELELKEGDIV
FVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcagctttgctggatctgttggagtgtcctgtttgcttagaacgccttgat
gcttctgcaaaagtcttgccttgccagcacacgttttgtaaacgctgtctgctgggcatt
gtgagctcccgaaatgagctgcgatgtccggagtgcaggaccttagtggactgcagcgtt
gatgaactgcccagtaacattttgcttgttagactactggatggcatcaaacagaggcct
cgaaaacccagcactggtggtgggactggtagcgcaaatgctttaagggttcccatcaac
actgtagctaattgcggatcaaaggacctgcagagctctcaagttggacagcagcaaagg
gtgcaagcacggagccctcctgttaggggtgtacctcagttaccatgtgccaaagcattg
tataactacgagggaaaagaacctggagatcttaaattcagtaaaggagacatcatcatt
ttgcgtcgacaggtggatgaaaattggtatcatggagaagtcaatggcatccatggcttt
tttcctaccaattttgttcagattattaaacctttacctcagcctccgcctcagtgcaaa
gcactttatgactttgaagtaaaagacaaggaagcagataaagactgtttaccatttgca
aaggatgatgttctgactgtaattcgccgtgtggatgaaaactgggcagaaggaatgctg
gctgacaagataggaatatttccaatttcatatgttgagtttaacacagcagccaaacag
ctgatagaattggataagccctcaggttctgctgttgactctggagaaggtacctctggg
gcagcccacaacaattcaacccaaaagcacaccgataccaagaaaaacaccaaaaaacgg
cactcttttacctccctcacgatgtccaacaagtcttcacagtcttctcagaatcgccac
tcgatggaaattagtccacctgtcctcatcagctccagcaacccaaccgcagcagcccgc
ataagtgagctgacaggactttcgtgtagtgccccttctcaggttcatatcggtactacg
gggctaattgtgactccaccccctagcagcccagtcacaacagggccttcatttaccttc
ccttcagaagttacctaccaagctgctcttggtaatatgaatcccccacttccgccacca
cctctcttgtctgctgcaatcattgcatcggcttcttctggacctcagtctgcaggtgta
atacaaaggcctacatcaggaccaactgaccaaatggcacatttacgaccacaaactcgt
ccaaatgtgtatattgctatatacccttacactcctcgaaaagatgatgaactggaactg
aggaagggagaaatgttcttagtgtttgaacgctgtcaagatggttggttcaagggaact
tccatgcatacaagcaagattggtgtttttccaggaaattatgtggctccagttacaagg
acagtgacaagtacatcacaaacaaaagttcccatgtctactgctggccagacgggacga
gtggtaactatggtcagcccttccactactggtggaacatcacagaagctccaggggaat
ggtgtggcagtgaactccagcacagtacccacagctgtggtttctgcagcgcatatccaa
actagtccgcaagccaaggtccttatgcatgtgacaggacaaatgacagtcaaccaggct
cgcaacgcagttagaacagttgctgcacacagccaagaaagacctacggcagcagtcaca
cccatacaagcacagagtccaacatgccttattcctgcagctgtgatcattccccaccac
tctgttgcctcccagcagctccagcccccagcaaatagtgctgcttatgtcacagctgtg
aatgtgaaccgctcaaccatcccactggcatgtgcagcaggttctttgaattctcccaac
attgctgcttcatctttggaggaagatgttagtggaagaactgtaaacactcacgctgga
gctcctgcatctccagagagtgctctagcagctggtggaaatgctgctgtcagtaaagca
gacaaggatggcaagaaagaaaaaaagggtttgctgaaactgctttctggagcatccact
aaacgcaagccccgattgtcacctccagcatcaccaacgctggaggctgagcaagcagcc
gcagagttagccctgcaaggtgcagttgggccagagcttccgtcagccagcggtcacagc
aaagctggatcctgtcccaccgacagtgaggtctctgggctcgtgcaggagacactacat
cggaaaacaagttccctggattcctctattcctatagcgccaccgcctaggcagccttgc
tcatccctgggtccggtcctgagtgaatccaggcctcttgtctgtgaaaggtacagggtt
gtggtatcctatcctcctcagagcgaagccgaacttgaacttaaggaaggtgacattgtt
tttgtacacaaaaaacgtgaggatggctggttcaaaggcactctgcaacgaaatggaaaa
actggccttttccccggcagctttgtagagaacatttga
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