Strigops habroptila (Kakapo): 115611163
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Entry
115611163 CDS
T08851
Symbol
PODN
Name
(RefSeq) LOW QUALITY PROTEIN: podocan
KO
K25037
podocan
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shab00535
]
115611163 (PODN)
Proteoglycans [BR:
shab00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
115611163 (PODN)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
115611163
NCBI-ProteinID:
XP_030349475
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Position
8:56770341..56794839
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AA seq
611 aa
AA seq
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MXLTWHEPREPVGAREMFFSIHLISDSKGAMPAGGRALLALLALGCAAAARPPAHNDFPE
RRPPGPAPACPRDCGCTQEGVVDCGGIDLKEFPLQLPELTNHLSLQNNQIEEIFPEELAR
LYRLETLNLQNNRLTSKGLPEEAFEHLENLNYLYLANNKLTVAPKFLPNTLISADFAANY
LTKIYGLTFGQKPNLRSVYLHNNKLSDAGLPDNMFNGSNNVEILIMSSNFLKYVPKNLPP
ALYKLHLKNNKLEKIPKGAFSELTGLRELYLQNNYLTNEGMDNETFWKLSSLEYLDLSSN
NLSQIPSGLPRNIVLLHLEKNAIKVIGRDVLTQIKNLEYLLLHNNKLKARGIHPLAFQGL
KKLHTVHLYNNMLERIPSGLPRRVKTLMILHNQISEINRNDFATTYFLEELNLSYNKLKS
PQIHREAFRKLRQLKSLDLSGNNLHTVPFGFPKNLQILKLKENEISIIPKGTLSGMTKLR
ELYLSNNKLKVNSIYSRAWQELSSLQSLDMAGNQLTSIPSDLPESLEYLYLQNNKITTVS
ENAFESTPKIKGIYLRFNKIAVGALKESIFQNLKHLQVLDIEGNLEFSNSSKNKDDSEEE
MEDEEEEEELR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtaactgacatggcatgagccgcgggagcctgtgggggcaagagaaatgttcttctcc
attcatctgatttctgacagcaaaggggcgatgccggccggcggccgggcgctgctggcg
ctgctggcgctgggctgcgccgccgccgcccgcccgcccgcacacaacgacttccccgag
cggcgtccgcccggcccggctccagcctgtccccgcgactgcggctgcacccaggagggc
gtcgtggactgcggcggcatcgacctgaaggagttcccgctgcagctgcccgagctcacc
aaccacctctccctgcagaataaccagatagaagaaatctttccagaagagcttgctcgg
ctttacagactagaaactctcaatttgcaaaacaacaggctgacttcaaaagggttgcca
gaggaagcatttgagcatctggagaacctgaattacctgtacctggcaaacaataagcta
acagtggctccaaaattcctaccaaacaccttgatcagtgcagattttgcagccaattat
ctcactaagatctatgggctcacttttggacagaaaccaaacctgagatctgtgtatctt
cacaacaacaaactttcagatgctgggttacctgataatatgttcaatggctctaataat
gtggagatactcatcatgtccagcaatttcttgaagtatgttccaaagaatctccctcca
gcactatataaattacacttaaagaacaacaagctggagaagattcccaaaggagccttc
agtgaacttacaggtctgcgggagctgtatttacagaataactacttgactaatgaagga
atggacaatgaaaccttctggaaattgtctagtctggaatatctggatttgtccagcaat
aacctctcacaaatcccaagtggtttacctcgaaacatcgtcctccttcacctggagaag
aatgcaattaaagtgattggcagagatgtcttgacccaaattaagaacctggagtatctt
ttgctccacaataacaaattaaaagcccgaggtattcacccattagccttccagggctta
aagaagctgcacactgtccacctgtacaacaacatgctggaaaggattcccagtgggctg
ccccgacgagtgaaaacacttatgatccttcataaccagatctctgagattaacaggaat
gactttgctaccacttacttcctggaagagctgaacctgagctacaataagctcaaaagt
cctcagatccatcgggaggctttccgtaaactaaggcaactaaagtccttggatctctct
ggaaacaatctccacacggtgccctttggctttccaaagaacttgcagattctgaagctg
aaggagaatgagataagcatcatcccaaaagggactttgtctgggatgacaaagctgcgg
gaactatatttgagcaacaataaactgaaagtgaattcaatttattcaagagcatggcaa
gaactcagcagtctccagtcactagacatggctggcaaccagctgacttctatcccatca
gacctgccagaatctctggagtatctgtatcttcagaacaacaagatcacaacggtttca
gagaatgcttttgaatccacacccaaaataaaggggatttacctcaggtttaataagatt
gctgttggagcactgaaggaaagtatcttccaaaacctaaagcacttacaagtcctggat
attgaagggaaccttgaattcagcaacagttcaaagaataaggatgactcagaagaggaa
atggaagatgaggaagaggaagaagaactgagataa
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