Strigops habroptila (Kakapo): 115612233
Help
Entry
115612233 CDS
T08851
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115612233 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115612233 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Syntaxin_2
GCIP_N
Motif
Other DBs
NCBI-GeneID:
115612233
NCBI-ProteinID:
XP_030352108
LinkDB
All DBs
Position
8:complement(39501504..39571491)
Genome browser
AA seq
1601 aa
AA seq
DB search
MGGGGGERRALWLAVLWLWLPGRCGGAMDECTEERTGRPQRCMPEFVNAAFNATVLATHT
CGTPAEEYCVQTGVTGVTQSCHLCDAAQPHLQHGAAFLTDYNSPADATWWQSRTMLAGVQ
HPAAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCESTYHK
VNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATD
IRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCK
HNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHGGHCT
GCSDNTDGAHCERCRDSFYRQGSEEGCLPCSCNPVGSLSTQCDNYGQCSCKPGVMGDKCD
RCQPGFHSLSEAGCRPCSCNLAGSTGECNVETGRCTCKENVEGFHCERCKPGFFNLDSSN
PRGCTPCFCFGHSSVCTNAIGYSIYSITSSFQFGADEWRAEQRDGSEVLLQWNAETQDIS
VISDSYFPMYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDVVLEGAGLRVSVPL
IAQGNSYPSENALIYTFRLHEATDYPWRPALTAFDFQKLLHNLTSIKIRGTYSERSAGHL
DDVTITSARPGPGVPVTWVESCSCPAGYEGQFCERCSSGYRRETPSLGPYSPCVPCACNG
HSETCEPETGMCNCRDNTAGSHCEKCSDGYYGDATAGTASDCQPCPCPGGSSCAIVPRTK
EVVCTSCQAGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCDRQTGE
CLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCRACHCNPYGTVNQQTNCNQVTGQCECL
SHVTGRDCSACEPGFFNLQGGRGCERCNCHALGSTNGQCDIRTGQCECQPGVTGQRCDRC
EINHFGFGSEGCKPCDCDPEGSRSLQCLENGHCECKEGFVGNRCDQCEENYFYNRSWPGC
QECPACYRLVKDKVVEQRERLQELENLIANLGTGEETVTDQAFEERLKQAERDVMELLQE
AQNSKDVDQGLMDRLKDINSTLTSQLNRLRNIQGTVRETENLAEQARVRVEDTEDLIGLA
SDMLEKAKMAADNVSITPPESSGDPNNMTLLAEEARKLAERHKKEADEIVRIAKAANDTS
TEAYQLLLKTLAGENQTANDIDELNQKYNQARNISRDLEKQASKVLAEAEEAGNKALQIY
ANLTSLPAVDSTGLENEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKG
KTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAEEAL
KKIPAITQTIAEANNKTRQAELALGNAAADAREAKAKADDAEKIASTVQKNAAATKAEAD
KTFADVTELAREVDDMMKQLQDAEKELKRKQDDAEQDMMMAGMASQAAQEAEDNARKAKN
SVNSLLSVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVSFLEREARKQ
DDAIQAYNRDIEEILKDISNLEDIKKTLPSGCFNTPSIEKP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcggcggcgagcgccgggcgctgtggctggcggtgctgtggctgtggttg
cccgggcggtgcggcggcgccatggacgagtgcacggaggagcggaccggccgcccgcag
cgctgcatgcccgagttcgtcaacgccgctttcaacgccacggtgctggccacgcacacg
tgcgggacgccggccgaggagtattgcgtgcagaccggcgtcaccggcgtcacccagtcc
tgccacctctgcgacgccgcccagccccacctgcagcacggcgccgccttcctcaccgac
tacaacagccccgccgacgccacctggtggcagagccgcaccatgctggccggcgtgcag
caccccgccgccgtcaacctcaccctgcacctgggaaaggccttcgacatcacatacgta
cgtctgaagtttcataccagtcggccagagagctttgcaatctacaaacgcaccagggaa
gatggcccatgggtgccctaccagtattacagtggctcctgtgagagcacgtatcacaaa
gtcaatcgtggctttattcggactggagaggatgagcagcaggcgctctgtacggatgag
ttcagtgacatctcccccctcactgggggcaatgtggcattctcaacactggaggggcgt
cccagtgcctataactttgataacagccccgtgctacaggaatgggtgacagctacagat
attagagtgaccctcaatcgtctgaatacatttggagatgaagttttcaatgacccaaaa
gttctcaagtcatattactatgcaatttctgattttgctgtgggtggtagatgcaaatgt
aacgggcacgcgagtgagtgcgtgaagaatgagctcgggaagctggtttgcaactgcaag
cacaacacctttggggtcgactgtgagaagtgtcttcctttcttcaatgaccgtccatgg
aggagagcgacagcagagagtgccaatgaatgcttgccttgtgactgcaacgggaggtca
caggagtgctactttgaccctgagctgtaccgctcaacgggccatgggggccactgcacg
ggctgctcggataacaccgatggtgcccactgtgaaaggtgcagggacagcttctatcga
caggggagtgaggaggggtgtctgccctgcagttgcaaccctgttgggtccctcagcaca
cagtgtgacaactatggccagtgcagctgcaaacctggtgtgatgggtgataagtgtgac
cggtgccagccaggtttccactccctctccgaagctgggtgcaggccctgttcttgcaac
ctagctggcagcacaggggaatgcaacgttgagacaggacgatgtacatgcaaagaaaat
gttgaaggctttcactgtgagagatgcaaacctggatttttcaatctggattcctccaat
ccaaggggctgtactccctgcttctgttttggacactcctcagtctgcaccaatgccatt
ggctacagtatttacagcatcacctccagcttccagtttggagcggatgagtggcgtgct
gagcagcgtgatggctcagaagtcttactccagtggaatgcggagacccaggatatatct
gttatctcagacagctacttccccatgtattttgttgcaccacgaaagttcttgggcaac
caggttttgagttatgggcaaaacctgaccttctccttccgcgtggatagacgggataca
cgcctctcagcagaggatgtggtgctggaaggggctgggctgagagtgtcagtgccactc
attgctcagggcaactcttaccccagcgagaacgcgctgatctacaccttcaggctccat
gaggctacagattacccgtggaggcctgctcttacggcatttgacttccagaagcttctc
cacaacttgacttccatcaagatccgtgggacgtacagtgagagaagtgccggccacctg
gatgatgttaccatcacaagtgctcgtcctggacctggtgtgcctgtgacctgggtggag
agctgctcctgtccagcaggatatgaggggcagttctgtgagcgctgctcctctgggtac
cggcgagagacaccaagccttgggccctacagcccctgtgtgccgtgtgcttgcaatggg
cacagtgagacatgcgaaccagagacaggcatgtgcaattgcagggataacacagcaggg
tctcactgtgagaagtgcagtgatgggtactatggagatgcgacagcgggcacagcctca
gactgccagccctgcccgtgcccaggcggctcgagctgtgccattgtgccccgcacgaag
gaggttgtgtgcaccagctgccaggctggcactacaggcaagaggtgcgagctgtgtgac
gatgcctattttggagacccgctgggtgaaaatggtgctgtgaggccttgccgcctctgc
cagtgcaatgacaacatcgatcccaacgccgtggggaactgcgatcgccagacaggcgag
tgcctcaagtgcatctacaacaccgctggcttctattgcgaccgctgcaaagacggcttc
tttgggaaccccctggcccccgatcctgctgacaagtgcagagcttgtcactgcaatccg
tatggcactgtgaatcagcagacgaattgcaatcaagtgactgggcagtgtgagtgcctg
tctcatgtcactgggagggactgcagtgcctgtgagcctggcttcttcaacctccagggt
ggacgtggctgtgagaggtgcaactgccacgcactgggctccaccaatgggcagtgcgac
atccggaccgggcagtgtgagtgccagcctggcgtcaccggccagcgttgtgacagatgt
gagatcaaccactttggctttggctctgaaggctgtaaaccctgtgactgtgatcctgag
ggttcgcgctccctgcagtgcctggagaatggtcactgtgaatgcaaggagggctttgtg
gggaaccgctgcgaccagtgtgaggagaactacttctacaaccgctcctggccaggctgc
caagagtgtccagcctgctacagattagtgaaagataaggtggtagagcagcgtgagagg
ttgcaggagctggaaaatcttatagcaaatctaggtacgggagaagaaactgtaactgat
caagcctttgaagagagattgaagcaggcagaaagagatgttatggagttgctccaggaa
gcacaaaacagcaaagatgtagaccagggactcatggatcgtctcaaagacattaacagc
acgctaacgagccagctcaacaggctgaggaacatccagggcacagtgcgggagacagag
aacctggcggagcaagcccgggtgcgggtggaggacactgaggacctgatcggcttagct
tctgatatgcttgagaaggcaaagatggcagctgacaatgtgtccattacacctccagag
tcaagcggggaccctaacaacatgactctgttggcagaagaggcccgtaagctggctgaa
agacacaaaaaagaagccgatgagattgttcgcatagctaaggcagcaaatgatacttcc
acggaagcctatcagctgctgctgaagaccctggctggggaaaaccaaactgcaaatgac
atcgatgagctcaaccagaagtataatcaggcaaggaacatttctcgagacctagaaaaa
caggccagcaaagtgcttgcagaggcagaggaagctggaaacaaagcccttcagatctac
gctaatctcaccagtctacctgctgtggattccacagggctagagaatgaagcaaataag
atcaagaaggaagcggaggagttagatcagctaattgccaggaagctgaaagattatgag
gatttgagagaagacatgaaaggaaaggagctggaagtaaagaacctcttggagaaaggg
aagacagagcagcagactgcagaccagctcttggctcgagcagatgcagcgaaagccctg
gctgaagaagctgctcggaagggcaatggcacactgcaggaggctaataccattctcagc
aacttgaaagattttgataagcgggtgaacgataacaagacagcagctgaggaggctctg
aaaaagattcctgccattacccagaccattgctgaagccaacaataagacacgccaggcg
gagctggcgcttggcaatgctgctgctgatgctcgcgaagccaaggctaaagcagatgat
gctgagaaaatcgccagtactgttcagaagaatgctgctgctaccaaagccgaagctgac
aagacttttgctgatgtgacggagctggccagggaagtggatgacatgatgaagcaacta
caggatgcagaaaaagagctgaagcggaagcaggatgatgctgagcaggatatgatgatg
gcaggcatggcctcacaggctgcccaggaggcagaagacaacgccagaaaagcgaagaac
tctgtgaacagtttgctttctgtcattaatgacctgctggatcagttagggcaactggag
acagtggacttgaacaaactgaatgaaattgagggtaccctgaacagtgccaaagaccag
atgaaagatagcgacctggaccagaaagtgtcttttcttgagagagaagccaggaagcaa
gatgatgcaatacaggcctacaacagggacattgaagagatcctgaaggacattagcaac
ctggaagacatcaagaagaccttgccatctggctgttttaacaccccgtccattgaaaaa
ccctaa
DBGET
integrated database retrieval system