Strigops habroptila (Kakapo): 115613170
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Entry
115613170 CDS
T08851
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115613170 (MEX3B)
04121 Ubiquitin system [BR:
shab04121
]
115613170 (MEX3B)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115613170 (MEX3B)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115613170 (MEX3B)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115613170 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
zf-C3HC4
KH_2
KhpA-B_KH
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115613170
NCBI-ProteinID:
XP_030354173
LinkDB
All DBs
Position
9:complement(9715853..9726535)
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AA seq
558 aa
AA seq
DB search
MPSSLFADMERNGSGGGGGGGGGGGGETLDDQRALQIALDQLSLLGLDNDETGSIYDSEP
RKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKED
VAMARREIISAAEHFSMIRASRNKNTALNGTVPGPPNLPGQTTIQVRVPYRVVGLVVGPK
GATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGIIELTDEN
DFHANGTDVGFELNGTGSLWSKPTPPSITPTPGRKPFCNYRNDSSSSLGSASTDSYFGGG
SGGGGGARLADYSPPSPALSFTHNGNNNNNSGSANGYVYGGGGGDVLSSPDCCSELPFDS
PPGFDLAPAPPPGAALLWPQFERGPAAPPSPAPSPATAFPGAAPANANLALLVSGPRRGG
GAPPPARLSPPLHGGAAGPEHPLARRVRSDPGGRLLAGSYPLYGNGLGAHLPGLPSDSSA
SSSSSSSSSSSSSCSSSGVRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKTE
PQCPVCHSAVTQAIRIFS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgcttttcgcagacatggagaggaacgggagcggcggcggcggcggcggt
ggtggcggtggcgggggagagaccctggatgaccaaagagccctccagatcgccctggat
cagctctccctgctggggctggacaacgacgagacgggctccatttacgacagcgagcct
cggaaaaagagcgtgaacatgaccgagtgcgtcccggtgcccagctcggagcatgtcgcg
gagatagtggggagacaaggttgtaaaatcaaagctctgcgggcaaagaccaacacctac
atcaagaccccggttcgcggggaggagccgctctttgttgtgacgggcagaaaggaagat
gtggccatggcccgcagggagatcatctcagcggccgagcacttctccatgatccgagca
tcacggaacaagaatacagccctgaacggcactgtccccggccccccgaacctgcccggc
caaaccaccatccaggtgcgggtgccttatcgcgtggtgggcttggttgtggggcccaag
ggggccaccatcaagcgcatccagcagcagacgcacacctacattgtgaccccgagccgg
gacaaggagccagtctttgaggtgacaggcatgcccgagaatgtggaccgggcccgggag
gagatcgaggcgcacatcgctatgcgcaccggcggcatcatcgagctgacggacgagaac
gacttccacgccaacggcacggatgtgggcttcgagctgaatggcacgggcagcctctgg
agcaagcccacgccgcccagcatcactcccaccccgggccgcaagcccttctgcaactac
cgcaacgacagctccagctcgctgggcagcgcctccaccgactcctacttcggcggcggc
tcgggggggggcggcggcgcccgcctggccgactacagccccccgagcccggcgctgagc
ttcacccacaacggcaacaacaacaacaacagcggcagcgccaacggctacgtgtacggc
ggcggcggcggcgacgttctctcctccccggactgctgctccgagctgccgttcgactcg
ccgcccggcttcgacctggcgcccgccccgccgccgggggccgcgctcctctggccgcag
ttcgagcgcggccccgccgcgcccccctcgcccgcgccctcgcccgccaccgccttcccg
ggcgcggcgcccgccaatgccaacctggcgctgctggtgagcggcccccggcgcggcggc
ggcgccccgcccccggcgcggctctccccgcccctgcacggcggcgcggcggggcccgag
cacccgctggcgcggcgggtgcgcagcgaccccggcgggcggctgctggctggctcctac
ccgctgtacggcaacgggctgggcgcgcacctgccggggctgccctccgactcgtccgcc
tcctcctcctcctcctccagctcctcgtccagctcctcctgctcgtcgtccggcgtgcgg
cggaagggcagccgcgactgctcggtgtgcttcgagagcgaggtcatcgcggcgctggtg
ccctgcggccacaacctcttctgcatggagtgcgccaaccgcatctgcgagaagacggag
ccgcagtgccccgtctgccacagcgccgtcacccaggccatccgcatcttctcctga
DBGET
integrated database retrieval system
