Strigops habroptila (Kakapo): 115614230
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Entry
115614230 CDS
T08851
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04142
Lysosome
shab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115614230 (CLTCL1)
04142 Lysosome
115614230 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115614230 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shab04147
]
115614230 (CLTCL1)
Membrane trafficking [BR:
shab04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
115614230 (CLTCL1)
Exosome [BR:
shab04147
]
Exosomal proteins
Proteins found in most exosomes
115614230 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
115614230
NCBI-ProteinID:
XP_030356617
LinkDB
All DBs
Position
11:9677897..9714837
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKDAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTV
ALVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATG
NQPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRIS
ADTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAG
AEELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPDQGLQFSQMLVQD
EEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYME
VVQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQ
QVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFA
CVDGEEFRLAQIGGLHIVIHADELEELISYYQDRGYFEELIGLLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFF
SKVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRL
EKHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLE
EGKQECFAACLFTCYDLLHPDVVLELAWRHNIMGFAMPYFIQVMREYLTKVDGLFYKVDK
LDASETLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aacccagcaaacattggattcagtaccctaactatggaatctgacaagttcatctgcatc
agggagaaagtgggagagcaggcacaagtagtgataattgacatgagtgatccaacaaca
cccatcagacgtccgatttctgcggaaagtgccatcatgaatccagcctccaaagtaatt
gcgctgaaagatgctgggaaaacacttcagatctttaatattgagatgaaaagtaaaatg
aaagcccacacaatggcagaggaagtgatcttctggaagtggatatctgtgaatacagtt
gccttggtgacagagacagcagtctaccactggagcatggagggagaatcgcaaccccaa
aagatgtttgaccggcatgctagtcttgcaggctgccaaatcatcaactataggacagat
gaacaccaaaaatggctgctgctgataggaatttcagcgcagcaaaatcgtgtggttggt
gcaatgcagctgtattcagttgatagaaaagtctcccaacctatagagggccatgcagca
gcttttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttctgttttgct
gtgaggagtcctgcagggggcaagctacacataattgaagtaggtcagccagctactgga
aatcagccatttgttaagaaagccgttgatgtgtttttcccacctgaagcacagactgac
tttcctgtggcaatgcagattggaattaagcacggtgttatctacctgatcacgaagtat
gggtatattcacatgtatgacttggagtctggagtgtgcatctacatgaaccgtattagt
gctgatactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaac
aaaaaaggccaggtgctttctgtatgtgtggaggaagacaacatagtgaactatgctaca
aatgttctccagaatcccgacttgggcctgcgcatggctatacggagtaatctagccggg
gcagaggaattatttgccagaaagttcaacacgctctttgctcaaggaagctacgcagat
gctgctaaagtagctgcatctgcaccaaagggaatcctacgtactagtgatacaatcagg
aagttccagagtgtaccagctcagcctggacaggcctctcccctgctccagtactttgga
atattgcttgaccaggggcagctgaacaagtttgagtctctggaactctgtcgccctgtc
ctacagcagggccgcaagcagcttctggagaagtggctgaaggaagacaagctggagtgc
tcagaggagctgggagacttggtgaagacagctgacccaacccttgcactcagtgtctat
cttcgtgctaatgtgccaaacaaagtgattcagtgcttcgctgaaactggtcaattccag
aaaatagtgctgtatgctaaaaaggttggctataccccagactggatcttcctactgaga
agcgtgatgagagtcagtccagatcaaggcctgcagttttctcagatgctggtacaggat
gaggagccactggctaacattaaccagattgtggatgtgttcatggagaacagtcttatt
cagcagtgcacgtcatttctgttggatgccctgaagaataaccgccctgcagaaggccac
cttcagactcgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccatt
cttggaaaccaaatgtttacacactatgatcgtgctcatattgcccagttgtgtgaaaag
gcaggcttgctccagcgagctttggaacactacacggatctctatgatattaaacgtgct
gttgttcatactcacctcttgaatcctgagtggcttgtgaacttctttggctccctctca
gttgaagactctgtggagtgtttgcgtgccatgctgtcagccaacattaggcaaaaccta
cagctctgtgtgcaggttgcttctaaataccatgagcagcttggtacccagtctcttgtg
gagctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgta
aacttcagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagactggt
cagataaaggaagtggaaagaatctgccgtgaaagtaactgctataacccagaacgggtg
aagaactttctgaaggaggcaaagctcacagaccagcttcctctgatcattgtctgtgat
cgatttgattttgttcatgacctggtgctgtacttatatcgcaataacctgcagaagtat
atagagatttacgtacagaaggtgaatcctagccgtataccagcagtggtcggagggctg
cttgatgtggattgttctgaagatgtcattaagaacttgatcatggtggttagaggccag
ttctcaacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttg
ccatggctggaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgccttg
gccaaaatctacattgacagtaacaataatccagagcggttccttcgtgagaatccttac
tatgacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgtt
gcttatgagagagggcaatgtgatttggaactcataaaggtctgcaatgagaactcactg
tttaagagtgaggctcgctatctggtgcgcaggaaggatcctgagctctgggcaaatgtt
ctggaagaaaacaacccattcaggcggcagcttattgatcaggttgtccaaacagcttta
tcagaaacacaggatccagaggaggtttctgtaactgtgaaagctttcatgactgctgac
ctgcctaatgaattgattgagttactggaaaaaattgtcttggataattctgtattcagt
gaacacaggaatctccagaatctgctgatcctgactgccattaaggctgaccgcactcgt
gtgatggaatacatcaatcggctggataactatgatgccccagatattgcgaacattgcc
atcagtaatgagctatatgaagaagcctttgctatattcagaaaatttgatgttaatact
tcagcaattcaggtgctgattgagcacattggcaacttggaccgtgcttatgaatttgca
gagcggtgtaatgaaccagcagtatggagccagctagccagagcacagctccagaaggac
ttggtgaaagaagccattgactcctatataaaggcagatgatccatctgcctacatggaa
gttgttcaagcagcaaatagaaatgataactgggaggaccttgtcaagttcttgcagatg
gccaggaagaaggctagagagtcttacgtagagactgaacttatttttgctttggcaaaa
actaatcgtctgtcagaactggaggagtttattagtggccctaacaatgcccatatacaa
caggttggtgatcgctgttatgaagaggggatgtatgaggctgcaaaactactctataac
aatgtgtctaactttgctcgcctggcatctaccctggtgcacctcggagagtatcaggca
gcagtggacagtggccgcaaagccaatagcacaaggacatggaaagaggtgtgctttgcc
tgtgtagatggagaagaattccgcttggcacagatcggtggtttacacatagtcatccat
gctgatgaacttgaggagctgatcagctactatcaggatcgtggatatttcgaagaactg
attggccttctggaagctgctctgggcctagagcgtgctcacatgggcatgtttactgaa
cttgccatcttgtactccaaattcaagcctcagaaaatgagggaacatctggagctcttc
tggtctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggca
gaacttgtattcctctatgacaagtacgaggagtacgacaatgcaataatcactatgatg
aatcatcccactgatgcctggaaagaaggacagtttaaagacataattgccaaggttgcc
aatgtggagctgtactacaaagccttgcagttctacttagactacaaacctctactgatc
aatgatctcctgcttgtattatctccacgactggatcacacaaggacagtcaactttttc
tcaaaggttaatcagctacttctagtaaagccttatctgcgttcagtccagaaccacaac
aacaaaggagttaacgaagctctaaacaatcttttaacagaggaggaagatttccagggg
ttgagagcttccattgatgcctatgacaactttgataacataacattggctcaacgtctg
gaaaagcatgaactaattgaatttaggcgtattgcagcatacttgtataagggtaacaac
cgttggaagcagagtgtggaactgtgcaaaaaagaccgtctgtataaggatgctatgcag
tatgctgcagagtccaaagatgcagagctagctgagaagctgcttcagtggttcctggaa
gaaggcaagcaggagtgctttgcagcctgccttttcacatgttatgacttgctgcaccca
gatgtagtccttgagttggcatggaggcataacatcatgggctttgcaatgccttatttc
atccaagtgatgagagagtaccttaccaaagttgatgggctgttctataaggtggataaa
cttgatgcttctgaaaccctaagaaaagaagaggaacaagtaactgaacccactccaata
gtatttggccagcagctgatgttaacagcaggcccaagcgcagtacctccccaggcaaac
ttcccatatggatacacagcaccaggattcacccagccgcctgtttatggtttcaatatg
taa
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integrated database retrieval system
