Streptomyces harbinensis: HUT13_13410
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Entry
HUT13_13410 CDS
T07389
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
shar
Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shar03021
]
HUT13_13410
Transcription machinery [BR:
shar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUT13_13410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_Tnp_ISL3
HTH_24
MarR
HTH_31
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QKV69667
UniProt:
A0A1I6T5E1
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All DBs
Position
2997195..2998049
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AA seq
284 aa
AA seq
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MSVELGSSKVLTTAGTPQEPEPLPAVPPTDNLDTRTLSRSLFQRLAGLEKDSPERGYVRD
TLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVG
EIKRFFRDTSWSVRVPRRLQELRLALTKASDELAQRLDRSPTVAELAACLGVSEEEVVDG
LAVGNAYTASSLDSPAPEEDGGEGSLADRLGYEDGALEGVEYRESLKPLLAKLPARERRI
IMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRDGLTAEE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctccaaggtgctcaccacagccggcacgccgcaggaaccc
gaaccgctccccgccgtaccgccgaccgacaacctcgacacccgcacgctctcccgctcg
ctgttccagcgcctcgccggcctggagaaggacagccccgagcgcggctacgtgcgcgac
accctcatcgagctgaacctgccgctggtgcggtacgcggcggcgcggttccgcagccgc
aacgagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgac
cgcttcgactgcgaacgcggcgtggaattcccgacgttcgcgatgcccaccgtcgtcggg
gagatcaagcgcttcttccgcgacacctcgtggtcggtccgggtcccgcgccggctccag
gagctgcggctcgccctcaccaaggccagcgacgaactcgcccagcgcctggaccgttcg
cccaccgtcgccgaactggccgcctgcctgggcgtctcggaggaagaggtcgtggacggc
ctggccgtcggcaacgcctacacggccagctcgctggactcccccgcgcccgaagaggac
ggcggcgagggctcgttggcggaccggctcggctacgaggacggcgcgctggagggcgtg
gagtaccgcgagtcgctcaagccgctgctggccaagctgccggcgcgcgagcggcgcatc
atcatgctgcggttcttcgccaacatgacccagtcgcagatcggcgaggaggtcggcatc
tcgcagatgcacgtctcccggctgctgacccgcacgctcgcccagctgcgggacggtctg
acggcggaggagtga
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