Staphylothermus hellenicus: Shell_1273
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Entry
Shell_1273 CDS
T01249
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
shc
Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:
shc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
shc02048
]
Shell_1273
Enzymes [BR:
shc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
Shell_1273
Prokaryotic defense system [BR:
shc02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
Shell_1273
Subtype I-B factors
Shell_1273
Subtype I-C factors
Shell_1273
Subtype I-D factors
Shell_1273
Type II CRISPR-Cas system
Subtype II-B factors
Shell_1273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
PDDEXK_3
DUF3799
Csa1
Dna2
KIAA1328
Motif
Other DBs
NCBI-ProteinID:
ADI32368
UniProt:
D7D9C2
LinkDB
All DBs
Position
complement(1227210..1227833)
Genome browser
AA seq
207 aa
AA seq
DB search
MLQQYRSSQEILSIIYSEYMKEVYEKLEESKDPSIIFVTDLVACTHKYHLRHLFPELTIR
FEPAAILGDLVHSGLESILENRGFKTEYPVERKYKVKGKEYVLKGRVDAYNEEKGVVVEI
KTSRSTQNLPREHHVYQLQVYLNILNADKGILIYITPDRLLEFYVRKEKIDIKSLIKMVI
EDRVHPKWEWECKYCYFHKICPYRVGY
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
ttgcttcaacaatacaggtcttcgcaggaaatactctcaatcatatatagtgagtatatg
aaggaagtatatgagaaacttgaggaatcaaaggatccaagtataatatttgtaacagat
cttgttgcatgcactcataaataccatttacgccatttatttccagagctaactattagg
tttgaaccagcggctatactaggggatctggtgcattctgggctagaaagtattttggag
aatagaggttttaaaacagaatatcctgttgaacgtaaatataaggtaaagggtaaggaa
tatgttcttaagggccgcgttgatgcttataatgaggagaaaggcgttgtagttgaaatt
aaaactagtaggtcaacgcagaatctacctagagagcatcatgtttatcaattacaagtg
tatctcaacatcttaaatgctgataaaggtatactaatctatataacaccggataggtta
ctagagttctatgttagaaaggagaaaatcgatataaaatctcttatcaaaatggttata
gaggatagagtgcatccaaaatgggaatgggaatgtaaatattgttatttccacaagata
tgcccatacagggttggttattaa
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