Shewanella sp. MR-4: Shewmr4_0678
Help
Entry
Shewmr4_0678 CDS
T00388
Name
(GenBank) KpsF/GutQ family protein
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
she
Shewanella sp. MR-4
Pathway
she00540
Lipopolysaccharide biosynthesis
she01100
Metabolic pathways
she01250
Biosynthesis of nucleotide sugars
Module
she_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Shewmr4_0678
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
she01005
]
Shewmr4_0678
Enzymes [BR:
she01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
Shewmr4_0678
Lipopolysaccharide biosynthesis proteins [BR:
she01005
]
Lipid A
Shewmr4_0678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
GMP_synt_C
Motif
Other DBs
NCBI-ProteinID:
ABI37758
LinkDB
All DBs
Position
complement(785683..786660)
Genome browser
AA seq
325 aa
AA seq
DB search
MVDQSQLRQWGCKVIDIEKSALDNLYQYVDSVEFAQACELILNCTGKVIVMGMGKSGHIG
NKISATLASTGTPAFFVHPGEASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRKAI
PVIAMTGKPESTMARLSKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGF
TREDFAMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITDALYEISKKGLGMTAVID
EQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNING
LIVIDKDNHPVGALNMLDMVKAGVI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtagaccaatcacaattgcgccagtggggctgtaaagtcatcgatattgaaaaatcg
gccctcgacaatctttatcaatatgtcgattccgttgaattcgcccaagcctgcgaactt
attctcaactgtaccggcaaagtgatagtgatggggatgggaaaatcaggccatattggc
aataaaatctcggccaccctagccagcacaggtaccccagctttttttgtccatccaggt
gaagccagccatggtgacctaggcgtgctctcggacaatgatgtgattcttgcgatttcc
aactcgggcgagtcgagcgaaatcctcgcgctgatgcccgttatccaacgtaaagccatc
ccagtgattgccatgacaggcaagccagaatccaccatggcgcgtctatctaaaattcat
ttatgtattgaagtaccagaggaagcctgcccgcttgggcttgcgccaacctcaagtacc
acagcaaccttagtcatgggcgatgccatcgccattgccctcctgcaagccaaaggtttt
acccgagaagatttcgccatgtcccatccgggcggcgccttaggtcgtaagctgctgctt
aaggtcagcaacgtgatgcacagcggtgatgacttacctctggttaaacacgatatctgc
atcaccgatgccctgtatgagatctccaagaaaggccttggcatgaccgcagttatcgat
gagcaaaacaaactcgtgggtatctttaccgacggtgacctgcgccgcgttatcgatgcc
caagtcaacctacgcaccacgccgattgccgatgtgatgacgcgaaactgtgtcacaatt
actgaaaacgttttagcggcacaggcgctgcaagtgatggattccaaaaatatcaacggc
ctgatagtgatagataaagacaatcatcctgtcggtgcgctcaatatgctcgatatggtt
aaagcgggagtgatttaa
DBGET
integrated database retrieval system
