Shewanella sp. MR-4: Shewmr4_1606
Help
Entry
Shewmr4_1606 CDS
T00388
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
she
Shewanella sp. MR-4
Pathway
she00020
Citrate cycle (TCA cycle)
she00480
Glutathione metabolism
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01120
Microbial metabolism in diverse environments
she01200
Carbon metabolism
she01210
2-Oxocarboxylic acid metabolism
she01230
Biosynthesis of amino acids
Module
she_M00009
Citrate cycle (TCA cycle, Krebs cycle)
she_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shewmr4_1606
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Shewmr4_1606
Enzymes [BR:
she01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Shewmr4_1606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
ABI38683
LinkDB
All DBs
Position
1901329..1903554
Genome browser
AA seq
741 aa
AA seq
DB search
MKDNSPTIIYTETDEAPALATLSLLPIIKTFTDAAGVAVETRDISLSGRVIANFPEKLTD
AQKIGDHLAELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDE
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWSKESQSHVAHMSE
GDFYGSEQSVTLANADTVNIVLSQKDGQDVVLKSGLKLLAGEIIDASVMSKKALVSFFER
EISNAKAENVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHASLFAELGVDVNNGFG
DVYAKIAGLPADVRAQIEADIAAVYAERPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGKLHDTKALIPDRCYAGVYQETIAFCKEHGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVIDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDANRAHDAQLIAKVKQYLPEHDTSGLEISIMSPEEATRFSLVRIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQSKDEQLQAHFIPLAHALAANEQVIVAELNNAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcaccaacaattatttataccgaaaccgatgaagcgccagcactggca
acgctttctctgttacctatcatcaaaacctttaccgatgcggcgggtgttgcggttgaa
acccgtgatatttctttatcgggccgtgtgattgcaaatttccctgaaaaactgactgac
gcgcaaaaaattggcgatcacttagctgagctgggcgaattagccaatcaacctgaagca
aacatcatcaaactgccaaacatcagtgcctcgattccgcagttaaaagcctgtatttta
gagctgcaacagaaaggttacgacattccaaattatcctgacgagccaaagactgacgaa
gaaaagtctatcaaagcccgttacgacaagatcaaaggcagtgcggtaaacccagtactg
cgtgaaggtaactctgatcgccgcgcgccgctttcagtgaaaaacttcgccaagaaaaac
ccgcactctatgggtaaatggagtaaagagtcacaatctcacgttgctcacatgagcgaa
ggtgacttctacggtagcgagcagtctgtgactctggctaacgccgacacagttaacatc
gtattgtcgcaaaaagacggtcaagacgtggtattgaaatctggcctgaaactgctagct
ggtgagatcatcgacgcgtcagtgatgagcaaaaaagccttagtgagcttctttgagcgt
gaaatctccaatgccaaggccgaaaacgtgttgttatcactgcaccttaaagccaccatg
atgaaagtgtctgatcccattatgttcggccacgcagtgaaagtgttcttcaaacctgtg
tttgataaacatgcgtcattatttgctgagctaggcgttgatgtgaacaacggctttggc
gatgtatacgccaaaatcgctggtttacccgccgatgtccgtgcacaaattgaagccgat
atcgctgctgtttatgctgagcgcccagcgctggcgatggtggattctgataaaggcatc
accaacttacacgtaccaagcgacatcattatcgatgcttctatgcctgcggcgattcgt
tcatcaggccaaatgtggggccctgatggcaagttgcacgacactaaagcgctgatccca
gaccgttgctacgcgggtgtgtatcaagaaactatcgctttctgtaaagaacacggagcc
ttcgatccaagcactatgggcagtgtgccaaacgttggtctgatggcgcaaaaagccgaa
gaatacggtagccacgataaaaccttcgaaatcccagccgatggcgtagttaacgtgatt
gatgccagtggcaaagtgttaatgagccacaacgttgaagcgggcgatatttggagaatg
tgccaagttaaagatgcgccaattcgcgactgggtgaaattagctgtacgccgtgcacgc
ttaagcaatactcctgcggtattctggttagatgcgaatcgtgcccacgatgcgcagctg
attgctaaagtgaagcaatatctgcctgagcatgatacaagcggtttagaaatcagcatc
atgtcaccagaagaagcgactcgtttctcattagtgcgtattaaagaaggtaaagatact
atttctgttaccggtaacgtactgcgtgactacctgactgacttattcccaattctcgaa
ctgggtaccagtgctaagatgctgtctatcgtgccattaatgaatggtggcggcctgttc
gaaacgggtgcgggcggtagtgcgcctaaacacgtacaacaggttgaaaaagaaggtcac
ttacgttgggactctctgggtgaattcctggctttagcggcttctttagagcatttaagc
caaacagtgggtaaccctaaggcacaagtactggcggatactttagatcaagccatcggt
cagttcttagatagcaataagtcgccatcaagacgcgttggtgaactagataaccgtggt
agccatttctatctggcgatgtactgggcacaagcattagctgcacaaagcaaagacgag
cagttacaagctcactttattccactggctcacgcactagctgccaatgagcaagtgatt
gttgctgagttaaacaatgcgcaaggtgcaccagtggatttaggcggttactaccgttta
gatgctgcaaaagctgaaaaagccatgcgcccaagtgaaacactgaacaagttattaatt
gcttaa
DBGET
integrated database retrieval system
