Shewanella sp. MR-4: Shewmr4_2129
Help
Entry
Shewmr4_2129 CDS
T00388
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
she
Shewanella sp. MR-4
Pathway
she00470
D-Amino acid metabolism
she00550
Peptidoglycan biosynthesis
she01100
Metabolic pathways
she01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Shewmr4_2129
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shewmr4_2129
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Shewmr4_2129
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Shewmr4_2129
Enzymes [BR:
she01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Shewmr4_2129
Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Precursor biosynthesis
Amino acid ligase
Shewmr4_2129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
RimK
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ABI39202
UniProt:
Q0HIB5
LinkDB
All DBs
Position
2541753..2542763
Genome browser
AA seq
336 aa
AA seq
DB search
MSKINLLLLCGGGSAEHDISLLSANYFETSLAKSEQFNVLRVVLDKFGQYQTAAGDDCEL
TNNREIRFRDETKAPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLNQYDDEAIAQTQAALENWGSIFVKAASQGSSVGCYKVDDS
SKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYQGEVVATLPGEIICDSNTFYTFDEK
YAKSSKARTDVVAQNVPTDISEQIRAYAIKAFKGMKLRHLSRIDFFLTQDNEILLNEINT
FPGSTPISMFPKMLQNHGHDFTEYLSLVINGQLAAK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatcaatttacttttgctgtgcggcggtggaagtgcggaacacgatatttcc
ctactgtcggctaattattttgaaacctcattagcaaaatccgagcagtttaatgtactg
cgtgtggtactggacaagtttggccaataccaaaccgccgcaggcgatgactgtgagctg
accaataaccgcgaaattcgcttccgtgatgagaccaaggcgccttggcctgtggattat
gtgatcccctgtattcacggctatccgggcgagacaggcgacatccagtcgtactttaac
cttatccaactgccctactttggttgcgaatccgaagccagcagcaactgttttaacaag
atcaccgctaagatgtggttcagtgccttaggcattcctaacacaccttatatcttctta
aatcaatacgatgatgaagcgattgcccaaacccaagccgcgctcgaaaactggggttcg
attttcgtcaaagccgcatctcaaggttcttctgtgggttgctataaagtcgatgacagc
agcaaagtcgcaggcgtgttaaaagatgcctttggttatgcaccctatgtgattgtcgaa
aaaaccattaaagcccgtgagcttgaagtcgccgtttatgagtatcaaggcgaagtggtt
gcgactctgccgggcgaaatcatctgcgatagcaataccttctacaccttcgatgaaaaa
tacgccaagagcagtaaggcacgcaccgatgtagtcgcacaaaatgtgcctactgacatc
agcgagcagatccgcgcctatgcaattaaagcctttaagggcatgaagcttcgccatctg
tcacgtatcgactttttcttaacccaggataatgaaatcctgcttaacgaaatcaatacc
ttcccaggttcgacgccgatttcgatgttccctaagatgttacaaaaccatgggcatgat
tttaccgaatacttaagtttggtgattaacggccagttagcggctaagtga
DBGET
integrated database retrieval system
