Shewanella sp. WE21: CKQ84_08730
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Entry
CKQ84_08730 CDS
T05404
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shew03012
]
CKQ84_08730 (selB)
Translation factors [BR:
shew03012
]
Eukaryotic type
Elongation factors
CKQ84_08730 (selB)
Prokaryotic type
CKQ84_08730 (selB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
SelB-wing_2
bact_SelB_WH_2nd
MMR_HSR1
GTP_EFTU_D2
SelB-wing_1_3
SRPRB
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
AVI68668
UniProt:
A0A2R3F141
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All DBs
Position
2054371..2056410
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AA seq
679 aa
AA seq
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MVTAGHVDHGKSTLIRALTGMNTDRLPEEKRRGMTIDLGYAFMSLRDGSRLAFIDVPGHE
KFINNMLVGVSHARHALLVMACDDGVMPQTREHLQILALLPLHSLTLVLTKRDLVDSDKA
AQLVADGLTLLAEYGIEASGVFEVSANGTADLASNGVAALKAHILDLGEQESKRAEDASS
FRMTLDRAFSVKGAGCVVTGTVISGSVCVGDSLFSSGQKAKLRVRGIHCQGQEAQRAVTG
TRVALNLTGVDNHREPERGDWLSSLPQAELCSRPVVHIRAFDFLGCEPLVHWQNVHCHHG
ADHTLGRVSLLNEADEEGFCLAELVLEKPLLLCQDDRIVLRHIGGKQTLGAGRVLALKVP
NRKKRTPERVARLLQLARLDNPAHVVALLGQTQALELDEIAWRWQLTDEGLAMLLAQAGL
VRFGAFAIATSLLEQEKQQFITLLNEFHQQHPDQLGLGRNRLQRMSHSALPPELANKVLD
TLCQEGRMVLRGALLQLAEHKIVLDAEAQHCWQALAPWLAEQTAPVWVTEMGEYLELEPA
KLRLLCFQLVQQGFITAVVKDRYLLSEQICYYASLVRTHIAEHGKLETAEFKDMVGLGRK
VSIQLLEFFDRSGFTRRKYRSNSREVRDAELFFSHENWRKNIGVEPTQDCWQPYPDLKSG
RLTGDDVLPIEDLGIVENA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
attgtgactgcgggtcatgtcgatcatggcaagagcacgcttattcgtgctttgactggg
atgaataccgatcgtctgccggaggaaaaacgccgcggtatgacgatcgatcttggctat
gcgtttatgtcacttcgagatggttcgcgccttgcttttattgatgtgcccggccacgaa
aaatttatcaacaacatgctggtgggcgtgagtcatgctcggcatgccctgttagtgatg
gcctgtgacgatggcgtaatgccgcaaacccgtgagcatctgcaaattcttgcgctctta
cctttgcacagtttgaccttagtgctaactaagcgggatttagttgatagtgacaaggcg
gcacagcttgtcgccgatggactcactttgctggccgagtatggcattgaggccagtggt
gtttttgaagtgtcggcgaatggaaccgccgacttagcatccaatggcgtggcggcgctg
aaggcgcatattcttgatttaggtgagcaagagtcaaagcgagcggaggatgccagcagc
tttaggatgacgctcgatcgcgcctttagtgtgaaaggtgcgggttgtgtcgtgacgggc
acagtgatcagcggcagcgtatgtgtgggggatagtctttttagctcagggcaaaaggcc
aaactcagagtgcgaggcatacattgtcagggacaagaagcccaaagggctgtcacgggt
acacgcgtagcactcaatttaacgggtgtcgataaccatagggagccagagcgtggcgat
tggctgagcagtttgcctcaagcagagctctgtagccgccccgttgtgcacattcgagcc
ttcgattttttaggctgtgagccattagtgcattggcaaaatgtccactgtcaccatggt
gccgatcatactttaggtcgagtttccctgttaaatgaagctgatgaagaaggcttctgt
ctggcggagttagtactcgaaaagccactactcctatgtcaggacgatcgaattgtcctg
cgacacattggaggtaaacagactttaggtgcggggcgagtgttggcgctgaaagtccct
aatcgtaagaaacgtacacctgaacgagtcgcgagattactgcaattagcacgcttggat
aatcctgcccatgtggtggctttactcggccaaactcaggcgctagagcttgatgaaatc
gcgtggcgttggcaattaaccgacgaagggctggcaatgctgttagcccaagcgggttta
gttcgttttggggcatttgctatagcgacaagtttacttgagcaagaaaaacaacagttt
attactttacttaacgagttccatcaacagcatcctgaccaacttgggcttgggcgtaat
cgcttgcagcgaatgagccatagcgctttgccgcccgaattagccaataaagtgctcgac
acgctttgccaagagggacgcatggtattgcgtggcgccctgttgcaattggccgagcac
aaaatagtgctagatgctgaggcgcagcattgttggcaggcacttgcgccttggcttgcc
gagcaaaccgcccccgtgtgggtcaccgaaatgggcgaataccttgagcttgaacctgcc
aaattaaggctgctgtgtttccagctggtgcagcaggggtttattactgctgtggtgaag
gacagatatttgctcagcgagcaaatctgttactacgccagcttagtacgtactcatatt
gcagaacacggcaagctcgaaacggcagaatttaaagacatggttgggcttgggcgtaag
gtgagtattcaactgcttgagttctttgacagaagtggttttacccgtaggaagtatcgc
agtaatagtcgagaagttcgggatgcggagttgtttttttcccatgagaattggcggaag
aacataggagtcgaacctacccaggactgctggcagccctacccggatttgaaatccgga
cgcctcaccggagacgacgttcttccaatagaagacctagggatagtagaaaatgcgtaa
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