Shewanella sp. WE21: CKQ84_10130
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Entry
CKQ84_10130 CDS
T05404
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00061
Fatty acid biosynthesis
shew00071
Fatty acid degradation
shew01100
Metabolic pathways
shew01212
Fatty acid metabolism
shew02024
Quorum sensing
Module
shew_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CKQ84_10130
00071 Fatty acid degradation
CKQ84_10130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKQ84_10130
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shew01004
]
CKQ84_10130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shew04147
]
CKQ84_10130
Enzymes [BR:
shew01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CKQ84_10130
Lipid biosynthesis proteins [BR:
shew01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
CKQ84_10130
Exosome [BR:
shew04147
]
Exosomal proteins
Exosomal proteins of breast milk
CKQ84_10130
Exosomal proteins of breast cancer cells
CKQ84_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
SH3_1
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVI66201
UniProt:
A0A2R3ETY4
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All DBs
Position
complement(2339932..2341596)
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AA seq
554 aa
AA seq
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MDTAIKTPIEMLAHWAKTQGDQVYLRQPIKGQFLDFTWAEVQEKVQQLAGALHHLGLERG
DKIAVLSKNCAEWFITDLALMHGGYVSVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWA
DQEPGVGGELLRLAMPYDTMPAQYQWEQLLKLGYPLINAPLPTPDQVMTLIYTSGSTGQP
KGAIQTFASYGWTCQAVVRDLRTDGNDRLLSYLPLAHITERVAIEGSSFYSGSVVAFVES
LDSFVVDVQRAKPTVFFSVPRLWSLFQKNIIDKIGVSKLNLLLKIPLLSSFVKYKIHKGL
GLNHCRLLGSGSAPIPPSLIHWYHSIGLNICEAWGMTENCAYSIINYPFDARKIGTVGRP
VEDCQIRQGEDGELLLKSPGLMTAYYLQPETTAAAFDADGFFHTGDLCSIDADGCVTITG
RVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGANLQAREEV
RSSLKATLDSVNPHLESHEHVDAIVVVSDPWTIENDALTPTLKIKRHVLEKAFSERVDGF
RGAQVRWEDELTQK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcgattaagacgccaattgaaatgctggcgcactgggctaagactcagggg
gaccaagtctatttacgccaaccgatcaagggtcaattccttgattttacttgggctgaa
gttcaagaaaaagttcaacaacttgccggagccttacatcacttaggcttagagcgtggt
gataaaattgccgttctctctaaaaactgtgccgaatggtttatcaccgacctcgcgttg
atgcacggcggctatgtcagcgtacctatttaccctaccgccaacacagatactattcgc
tatgtgctgcaacacagtggcgcaaaagccatttttctcggcaagcttgaccattgggct
gaccaagaacccggtgtcggcggcgagctactacgccttgccatgccctatgatacgatg
ccagcacaatatcaatgggaacaattacttaagctaggctatcccttaattaatgccccg
ctgccgactccagatcaagtgatgacactcatctatacctctggctcgactggccaacct
aagggcgcgattcaaaccttcgccagctatggctggacttgccaagcagtagtccgtgac
ctgcgcaccgatggcaacgatagacttttatcctatttacccttagcccatatcacagag
cgcgttgcgattgaaggctcatccttctactcaggtagtgtggtggctttcgttgaaagt
ctcgactccttcgttgtcgatgttcaacgagcaaaaccaacggtattcttctcggtacca
cggttatggagcctgtttcagaaaaacatcatcgacaaaattggggtcagtaaacttaat
ctattattgaaaatcccactgcttagcagctttgtgaaatacaaaatccataagggttta
ggcttgaaccattgtcgtctactcggctctggctcggcgcctattccgccatcactgatc
cactggtatcacagtattggtcttaatatctgcgaagcttggggtatgacagaaaactgt
gcctattcgatcatcaactatccttttgatgcgcgtaaaattggtactgttggccgccca
gttgaggattgccagatccgccaaggcgaggatggtgagctactgctcaagagtccggga
ttaatgactgcttattatctgcagcctgaaactactgcagcggcattcgatgctgatggt
ttcttccacacaggcgatttgtgctcaattgatgccgatggttgtgtcactattactggc
cgagtgaaagacaactttaaaaccgccaagggcaaatatgtagcgcccgtgcctatcgaa
cgtaaactggcacaggatccccatgttgaactgatctgcgtgattggttctggtctgccg
catcccgtcgcactagtgcagttatccgaaggggcaaatctacaagcccgcgaagaagtc
cgctcctcactcaaagcgacacttgatagcgttaatccgcacttagagtcacacgaacat
gtcgatgcgattgtcgtggtcagtgatccttggacgattgagaatgatgcgctcacgcct
accctcaaaatcaaacgccatgtgcttgaaaaagcctttagcgaacgagttgacggcttt
cgtggcgcccaagtccgctgggaagatgaattaactcaaaaataa
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