Shewanella sp. FDAARGOS_354: CEQ32_04995
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Entry
CEQ32_04995 CDS
T04944
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEQ32_04995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_04995
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ32_04995
RecFOR pathway proteins
CEQ32_04995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
ASF14442
LinkDB
All DBs
Position
complement(1089624..1090241)
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AA seq
205 aa
AA seq
DB search
MIGRLRGVLIEKQAPEVLIDVNGVGYELQMPLTSFYELPELNQPTTVYTHFVVREDAQLL
YGFITKQERSLFRLLIKANGVGPKLALTILSGMTASEFVGCVERDDIVTLVKLPGVGKKT
AERLLVEMRDKLKSLMEASVGSEREFVLQSNYSPAPTANSAEEDAISALISLGYKPPQAS
KAVSAAYKEGMDSETLIKAALKSML
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgataggtcgtttacgtggcgtattaatagaaaaacaagcgccagaggtgttgattgat
gtgaatggggtcggttacgaattacaaatgccgctgactagcttttatgagctccctgaa
ctcaatcaaccgaccacggtttatactcattttgttgtgcgtgaagacgcccagctgctg
tatggttttatcaccaaacaagagcgttcactgtttcgcttattgattaaggctaacggt
gttggcccaaaactcgcattaacaattctttctggcatgacggccagtgaatttgtgggc
tgtgttgagcgcgatgatatagtgacactggtaaaattacccggtgtcggtaaaaagacc
gccgaacgtttattggttgagatgcgcgataaattgaagagcttaatggaggcatccgta
ggttctgagcgtgagtttgtgctgcaatccaactactcaccagcaccgacggccaacagt
gccgaagaggatgccatttcagccttgatctccctcggctataaaccgccacaggcgagt
aaagccgtatctgccgcctataaagaaggcatggacagtgagaccttgattaaagccgcg
ttaaaatcgatgctctaa
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