Slackia heliotrinireducens: Shel_19390
Help
Entry
Shel_19390 CDS
T00981
Name
(GenBank) Excinuclease ATPase subunit
KO
K03701
excinuclease ABC subunit A
Organism
shi
Slackia heliotrinireducens
Pathway
shi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Shel_19390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shi03400
]
Shel_19390
DNA repair and recombination proteins [BR:
shi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shel_19390
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Shel_19390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
nSTAND1
Anti-TRAP
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_25
BCA_ABC_TP_C
ATPase
TMEM106_N
RsgA_GTPase
Viral_helicase1
DUF463
AAA_22
MobB
RecA
cobW
RNase_E_G_Thio
DUF5351
Motif
Other DBs
NCBI-ProteinID:
ACV22955
UniProt:
C7N7S0
LinkDB
All DBs
Position
complement(2172481..2174994)
Genome browser
AA seq
837 aa
AA seq
DB search
MSRTRKPAPQAMEIRGARVHNLKNVDVDIPLNKLVGVAGVSGSGKSSLALGVLYAEGSRR
YLEALSTYTRRRMSIAAEADIDRVEYVPAALALHQRPAVPSVRSTFGTSTELLNVLRLMF
SRLASHRCPNGHMVPPSKNVAAELPIVCPECGEEFYGPGAESLAFNSEGACPTCQGTGIM
RTVDESKLVPDESLTIDEGAVVPWGSLMWSLMTDVAREMGVRTDVPFCELTPEERDIVFH
GPAEKKHILYKAKKTDTFAEMDFTYYNAVYTVENALSKAKDEKALARVQRFLREDVCSEC
GGTRLSEASRAPLIKGIDLAQATAMTLEEAYEWVQTVPSWVPEDMRDMAESIVSQFVHTA
KRLLDLGLGYLSLDRAGSTLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNIDGL
LEVVDDLLEYGNSVVLVDHDVRMLRAADWIVEMGPGSGASGGRVVAEGPVDAVVANPASR
IGGFLAGTEQVVVRERASEEELFEHGIIHLQTSPIHTVHGLELDIPKGRLTAVTGVSGSG
KTTLVLESLVPALHAATAGEQLPSHVRAVSAEGIKRASLIDATPIGANVRSTVATYSNVL
DDLRRLYASLPSAKAAGLSLKDFSYNTGSLKCPVCEGTGQISLDVQFLPDVDIPCPECRG
GRYAKTAYEHRYVSSIQDARFPGGISLPELMSLTVDEALAFMRNEKRIAHKLQTLADLGL
DYLTLGEATPALSGGEAQRLKLATEMGKSQQSSVFVFDEPTIGLHPLDVRTLIGVFQSLI
EAGATVIVIEHDLDMIANADYVVDMGPGGGEAGGRIVACGTPADIAADPESITGRYL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggacacgcaagcctgcgccgcaggcaatggagattcgcggcgcacgtgtgcac
aatttgaagaacgtagatgtcgacatcccgctgaacaagctggtgggtgtggcaggcgta
tcgggctcaggcaaatcgtcgctggcgcttggcgtgctgtatgccgaagggtcgcggcgc
tatctggaggcgctttctacctacacgcgtcgacgcatgagcatcgctgccgaggccgat
atcgatcgggtggaatacgttcctgccgcgctggcgcttcatcagaggcctgcggttccc
agtgtgcgaagcaccttcggcacctcgaccgagctcctcaacgtgctgcgactgatgttc
tcgcggttggccagccaccgttgtccgaacggccacatggtgccgccttcgaaaaacgta
gccgccgagctacccatcgtttgccccgaatgcggggaggagttctacggcccgggtgcg
gagtctctggcgttcaacagtgaaggcgcctgcccgacctgccaaggcacgggcatcatg
cgcacggtggacgagtcgaagctggttcccgacgagtccctcaccatcgacgagggcgcc
gtggttccttggggctcgctcatgtggtcgctcatgaccgatgtcgcccgcgagatgggc
gtgcgcaccgacgtgccgttttgcgagctgacgcccgaagagcgcgacattgtgttccac
ggtccagccgaaaagaagcacatcctgtacaaggcgaaaaagaccgacaccttcgccgag
atggatttcacatactacaacgcggtgtacacggtggaaaacgcgttaagcaaggccaaa
gacgagaaggcgctcgcccgcgtgcagcggttcttgagggaggatgtctgttccgaatgc
ggcggcacgcgtctgtccgaagcttcccgtgcgccgctcatcaagggcatcgatttggcc
caggcgacggccatgacgctggaagaggcctacgaatgggtccagactgttccgtcgtgg
gtgccagaagacatgcgagacatggcggaaagcatcgtgtcccagttcgtacatacggcg
aaacgtcttcttgatttgggactgggctatctgtcgctggaccgtgccgggtcgacgctc
tccactggcgaacgccaacgcgtccagcttgcccgggcagtgcgcaaccgcaccacaggc
gtgctctacgtgttggacgaaccgtccatcggcctgcatccttcgaacatcgacgggctt
ctggaggtcgtcgacgacctgctggaatacggcaactccgtcgtgctggtcgaccacgac
gtccgcatgctgcgtgccgccgactggattgtggaaatgggccccggatcgggtgcttcg
ggagggcgcgtggtggccgaaggccccgtggatgctgtggtggccaatcccgcatcccgc
atcggaggctttctggccggcaccgaacaggtcgtagtgcgcgagcgggcatccgaagaa
gagctgttcgagcacggcatcatccatctgcagacgagccccatccataccgtgcacggg
ctggagctggatattcccaagggtcgtctgacggccgtcacgggtgtttcgggatcgggc
aagaccacgctggtgttggaaagcctggtgccggcgctgcatgccgcgacggccggcgag
cagcttccctcccatgtgagggccgtttcggcagaaggcataaaacgagcgagcctcata
gacgccacgcctatcggtgccaatgtccgctcgacagttgccacgtacagcaatgtgttg
gatgacctgcgacggctgtatgcgtcgctgccctctgcaaaggcggcgggcctttcactt
aaagacttttcgtacaacacagggtcgctcaaatgcccggtctgcgaaggcaccggtcaa
atttccctggacgtgcagttccttcctgacgtggacattccctgtcccgagtgccgcggc
gggcgctacgcgaaaacggcgtacgaacatcgctacgtatcgtccattcaggatgcgcgg
ttccctggcggcatatcgcttcccgaactcatgtcgcttaccgtggatgaggcgctggcc
ttcatgaggaacgagaagaggatcgcccataagcttcagacgttggctgacctgggtttg
gattacctgacgttaggagaggcgacgcctgcgttgtccggcggcgaggcgcaaaggctc
aagcttgcgacggagatggggaagagccagcagagctcggtattcgtattcgacgagcct
accatcggcctgcacccgctcgatgtccgcacgctgataggcgtgttccaaagtctgatc
gaggccggagcgaccgtaatcgtgatcgagcacgatctggacatgatcgccaatgcggac
tatgtggtcgatatgggccccggcggaggagaggccggcggacgcatcgttgcctgcgga
acgccggcggatatcgcagccgacccagagagcattaccggacgctacctgtag
DBGET
integrated database retrieval system