KEGG   Slackia heliotrinireducens: Shel_19390
Entry
Shel_19390        CDS       T00981                                 
Name
(GenBank) Excinuclease ATPase subunit
  KO
K03701  excinuclease ABC subunit A
Organism
shi  Slackia heliotrinireducens
Pathway
shi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Shel_19390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shi03400]
    Shel_19390
DNA repair and recombination proteins [BR:shi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Shel_19390
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Shel_19390
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 SMC_N nSTAND1 Anti-TRAP DnaJ_CXXCXGXG AAA_29 AAA_16 AAA_25 BCA_ABC_TP_C ATPase TMEM106_N RsgA_GTPase Viral_helicase1 DUF463 AAA_22 MobB RecA cobW RNase_E_G_Thio DUF5351
Other DBs
NCBI-ProteinID: ACV22955
UniProt: C7N7S0
LinkDB
Position
complement(2172481..2174994)
AA seq 837 aa
MSRTRKPAPQAMEIRGARVHNLKNVDVDIPLNKLVGVAGVSGSGKSSLALGVLYAEGSRR
YLEALSTYTRRRMSIAAEADIDRVEYVPAALALHQRPAVPSVRSTFGTSTELLNVLRLMF
SRLASHRCPNGHMVPPSKNVAAELPIVCPECGEEFYGPGAESLAFNSEGACPTCQGTGIM
RTVDESKLVPDESLTIDEGAVVPWGSLMWSLMTDVAREMGVRTDVPFCELTPEERDIVFH
GPAEKKHILYKAKKTDTFAEMDFTYYNAVYTVENALSKAKDEKALARVQRFLREDVCSEC
GGTRLSEASRAPLIKGIDLAQATAMTLEEAYEWVQTVPSWVPEDMRDMAESIVSQFVHTA
KRLLDLGLGYLSLDRAGSTLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNIDGL
LEVVDDLLEYGNSVVLVDHDVRMLRAADWIVEMGPGSGASGGRVVAEGPVDAVVANPASR
IGGFLAGTEQVVVRERASEEELFEHGIIHLQTSPIHTVHGLELDIPKGRLTAVTGVSGSG
KTTLVLESLVPALHAATAGEQLPSHVRAVSAEGIKRASLIDATPIGANVRSTVATYSNVL
DDLRRLYASLPSAKAAGLSLKDFSYNTGSLKCPVCEGTGQISLDVQFLPDVDIPCPECRG
GRYAKTAYEHRYVSSIQDARFPGGISLPELMSLTVDEALAFMRNEKRIAHKLQTLADLGL
DYLTLGEATPALSGGEAQRLKLATEMGKSQQSSVFVFDEPTIGLHPLDVRTLIGVFQSLI
EAGATVIVIEHDLDMIANADYVVDMGPGGGEAGGRIVACGTPADIAADPESITGRYL
NT seq 2514 nt   +upstreamnt  +downstreamnt
atgagcaggacacgcaagcctgcgccgcaggcaatggagattcgcggcgcacgtgtgcac
aatttgaagaacgtagatgtcgacatcccgctgaacaagctggtgggtgtggcaggcgta
tcgggctcaggcaaatcgtcgctggcgcttggcgtgctgtatgccgaagggtcgcggcgc
tatctggaggcgctttctacctacacgcgtcgacgcatgagcatcgctgccgaggccgat
atcgatcgggtggaatacgttcctgccgcgctggcgcttcatcagaggcctgcggttccc
agtgtgcgaagcaccttcggcacctcgaccgagctcctcaacgtgctgcgactgatgttc
tcgcggttggccagccaccgttgtccgaacggccacatggtgccgccttcgaaaaacgta
gccgccgagctacccatcgtttgccccgaatgcggggaggagttctacggcccgggtgcg
gagtctctggcgttcaacagtgaaggcgcctgcccgacctgccaaggcacgggcatcatg
cgcacggtggacgagtcgaagctggttcccgacgagtccctcaccatcgacgagggcgcc
gtggttccttggggctcgctcatgtggtcgctcatgaccgatgtcgcccgcgagatgggc
gtgcgcaccgacgtgccgttttgcgagctgacgcccgaagagcgcgacattgtgttccac
ggtccagccgaaaagaagcacatcctgtacaaggcgaaaaagaccgacaccttcgccgag
atggatttcacatactacaacgcggtgtacacggtggaaaacgcgttaagcaaggccaaa
gacgagaaggcgctcgcccgcgtgcagcggttcttgagggaggatgtctgttccgaatgc
ggcggcacgcgtctgtccgaagcttcccgtgcgccgctcatcaagggcatcgatttggcc
caggcgacggccatgacgctggaagaggcctacgaatgggtccagactgttccgtcgtgg
gtgccagaagacatgcgagacatggcggaaagcatcgtgtcccagttcgtacatacggcg
aaacgtcttcttgatttgggactgggctatctgtcgctggaccgtgccgggtcgacgctc
tccactggcgaacgccaacgcgtccagcttgcccgggcagtgcgcaaccgcaccacaggc
gtgctctacgtgttggacgaaccgtccatcggcctgcatccttcgaacatcgacgggctt
ctggaggtcgtcgacgacctgctggaatacggcaactccgtcgtgctggtcgaccacgac
gtccgcatgctgcgtgccgccgactggattgtggaaatgggccccggatcgggtgcttcg
ggagggcgcgtggtggccgaaggccccgtggatgctgtggtggccaatcccgcatcccgc
atcggaggctttctggccggcaccgaacaggtcgtagtgcgcgagcgggcatccgaagaa
gagctgttcgagcacggcatcatccatctgcagacgagccccatccataccgtgcacggg
ctggagctggatattcccaagggtcgtctgacggccgtcacgggtgtttcgggatcgggc
aagaccacgctggtgttggaaagcctggtgccggcgctgcatgccgcgacggccggcgag
cagcttccctcccatgtgagggccgtttcggcagaaggcataaaacgagcgagcctcata
gacgccacgcctatcggtgccaatgtccgctcgacagttgccacgtacagcaatgtgttg
gatgacctgcgacggctgtatgcgtcgctgccctctgcaaaggcggcgggcctttcactt
aaagacttttcgtacaacacagggtcgctcaaatgcccggtctgcgaaggcaccggtcaa
atttccctggacgtgcagttccttcctgacgtggacattccctgtcccgagtgccgcggc
gggcgctacgcgaaaacggcgtacgaacatcgctacgtatcgtccattcaggatgcgcgg
ttccctggcggcatatcgcttcccgaactcatgtcgcttaccgtggatgaggcgctggcc
ttcatgaggaacgagaagaggatcgcccataagcttcagacgttggctgacctgggtttg
gattacctgacgttaggagaggcgacgcctgcgttgtccggcggcgaggcgcaaaggctc
aagcttgcgacggagatggggaagagccagcagagctcggtattcgtattcgacgagcct
accatcggcctgcacccgctcgatgtccgcacgctgataggcgtgttccaaagtctgatc
gaggccggagcgaccgtaatcgtgatcgagcacgatctggacatgatcgccaatgcggac
tatgtggtcgatatgggccccggcggaggagaggccggcggacgcatcgttgcctgcgga
acgccggcggatatcgcagccgacccagagagcattaccggacgctacctgtag

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