Shewanella halifaxensis: Shal_4287
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Entry
Shal_4287 CDS
T00654
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_4287
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_4287
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OprF
Motif
Other DBs
NCBI-ProteinID:
ABZ78827
UniProt:
B0TQE7
LinkDB
All DBs
Position
complement(5196470..5198602)
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AA seq
710 aa
AA seq
DB search
MSVGTSFKFSRLGLAIVAALASSSAFAEDTSAESTIVAEPNIERISVTGRSFNDYNVGSS
SGAMRGDIDILDTPQSVTVIPDFVTDEQLATNLSEVLVNDSSVTGGSEKWNRQVFNIRGF
ELSSGSGFLINGQQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLINMVTKKPTYET
MLDIGFDTDENGSTRFQLDAGGSLNEAETIRYRTVLVKQDTTYWREYQDGSHQERDRWLG
YLNLEFDITDDLLLSLKYDHTQDKTGIDRGGWLDSSGDLIGGRDIIWDQPWAFTDNTISN
LGAELTYHLTDDWKVKAGYNDQQFNRQRLDSSPSLISGSEDPFTDGYYISPFDRYDDWQH
KTGFVDFTGNFYTGDLEHQLLIGANMLDYYYGQLKESGEKKQVVMPGQPVPKPDLDYNRD
VTKYESEYKHYGFYVQDLVTITDEWQVLAGVRYDEQKKEGAGSNSYAVSPKFGVIYSPAD
NGSIYVNYSKSFTPQGIVNNIDDVNDGKNLDPEYGEQYEIGTKWELFDGSLLLTGAVFDI
TVSNVTVTEEIEGSSQTITTQSGEQRHKGFEMGAQGQVSDSWFMTGSMMYLDAEYLRPET
DSLNGKTPVDAPEWSANVWTRYEMTDDLAFNFGALYVGERFANTSNTISKDGYVRFDMGA
AYTMDVMGSDVSVRVNVKNLFDTDYLAGGTNTDVTVGEGRHFSLALEAKF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgggacgtcatttaagttttcacgtttaggcctagcaatcgttgctgcattg
gcttcatcttctgcatttgccgaggatacaagtgctgaatccactattgtagccgagcca
aatatcgagcgcatcagcgttaccggtcgtagctttaatgattataatgttggttcatct
tcaggcgcgatgcgtggtgatatcgacatcttggacacgcctcaatctgtcactgtaatc
cctgacttcgttaccgatgagcagctagcgactaacctttcggaagttctcgttaatgac
tcaagcgtgacaggtggctctgagaagtggaaccgccaagtattcaacattcgtggtttc
gaactctcttcaggctcaggtttcttaattaatggtcagcagcagtggtctcactatgta
cagccaatcgaaacgctgcagcaggttgaggtattaaaaggcccttcgagcatgctttat
ggtcagtctggtcctggtggcttgatcaacatggttaccaagaagcctacctatgaaact
atgttagatattggcttcgataccgatgagaatggctcgacacgtttccaactcgatgcc
ggtggcagcctcaacgaagccgaaacaattcgttaccgcaccgtgttagttaagcaagac
actacctactggagagagtatcaagatggcagccatcaggagcgcgaccgttggttaggt
tacctaaacctagagtttgatattaccgatgatctactgctatcgcttaagtatgaccat
actcaagacaagactggtatagatcgtggtggctggctagatagcagtggtgacttgatt
ggtggccgtgacatcatctgggatcagccatgggcatttaccgataacactatctctaac
ctaggtgccgagctaacttatcacctaacagatgattggaaagttaaagcgggctataac
gaccagcagtttaaccgtcagcgtttagactcttctccatcactaattagtggttctgaa
gatccatttacagatggttattacataagcccgtttgaccgttatgatgattggcaacac
aagacgggttttgttgatttcaccggtaacttctacacgggtgatttagagcatcaacta
cttatcggcgctaacatgctcgattattactatggtcagttaaaagagtctggtgaaaag
aaacaagttgtgatgcctggacagccagtacctaagccagatcttgattacaatcgtgat
gtaactaagtacgagagtgaatacaagcactacggcttctacgttcaagacctagtgacg
attaccgatgagtggcaagtgcttgctggtgtgcgttacgacgagcagaaaaaagaggga
gctggtagtaacagctatgcggtctcgcctaagtttggtgtgatctactcgcctgctgat
aacggtagcatctacgttaactactcgaagagttttactcctcaaggaatagtgaacaac
attgatgacgttaacgatggtaagaacctagatcctgagtacggcgagcaatatgaaatt
ggcaccaagtgggagctgtttgatggcagtctactattaaccggtgcggtatttgatatc
acggtatcaaatgtgacggtaaccgaagagattgaaggtagtagccaaaccattactact
cagtctggtgagcagcgccataaaggtttcgagatgggcgctcaaggtcaggtcagcgat
agctggtttatgacgggctctatgatgtacctagatgcagagtatcttcgtccagaaacc
gatagcctaaacggtaagacacctgtcgatgcgccagagtggtcggcaaacgtttggaca
cgttatgagatgaccgatgatttagcattcaacttcggcgctctctatgtgggtgagcgt
tttgccaatacgagcaacacgatcagtaaagatggttatgtacgtttcgatatgggcgcc
gcatacactatggacgtaatgggtagcgatgtgagtgttcgtgtaaacgtgaagaatcta
tttgataccgattatctggccggtggtaccaacactgatgtgactgtgggtgaaggccgt
cactttagtctagcactggaagctaagttctaa
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