Shewanella sp. MR-7: Shewmr7_1251
Help
Entry
Shewmr7_1251 CDS
T00389
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shewmr7_1251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_1251
Enzymes [BR:
shm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Shewmr7_1251
DNA repair and recombination proteins [BR:
shm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Shewmr7_1251
Prokaryotic type
Shewmr7_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ABI42250
UniProt:
Q0HXA5
LinkDB
All DBs
Position
complement(1459806..1460924)
Genome browser
AA seq
372 aa
AA seq
DB search
MKSTASFATRIVNWYDTHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMARF
PDVLALANAPDDEVLHHWTGLGYYARARNLHKAAKLVRDLHQGQFPTDFEQVLALPGIGR
STAGAVLSLSLGQHHPILDGNVKRVLARHGAIAGWPGQKPVEEQLWQLTEQLTPEQDIQK
YNQAMMDIGASICTRSKPNCAACPVAVDCKAQLMGRQTDFPGKKPKKTIPEKAAWMLVLL
KDNQVFLAKRPPAGIWGGLWCFPEFSTQAALNAELEAQGYHAAQLEPLIGFRHTFSHFHL
DIQPMLLNLDSQANGYNKQTSGMQSVGAVMEQNQSLWYNINQPSKVGLAAATERVLANLG
SLVAIASNLDSQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctacagcctcctttgctacacgtatcgttaattggtacgacacccacggtcgt
aaaaccctcccttggcagcaagataaaaccccatatcgcgtatgggtttctgagattatg
ttgcaacaaactcaggtagcgactgttatcccctattaccagcgttttatggcacgtttc
cccgatgtgttagccctcgctaacgcgccggatgatgaagtactgcatcattggactggg
cttggttattacgccagggctcgcaatctacataaagccgctaagttggttcgcgatctg
catcaggggcaatttccaacagactttgagcaagtgttagcgctgccaggtattggccgc
tcgacagcaggtgcagtgttatccctatcacttgggcaacatcatccgatcctcgatggc
aatgttaagcgcgtattagcaagacatggcgcgattgcgggctggcccggtcaaaaacct
gtggaagaacaactctggcaattaaccgagcaattaacgccagagcaggatattcaaaaa
tataaccaagcaatgatggatattggtgccagcatttgtactcgcagcaaacccaattgt
gccgcttgccctgtggctgtcgattgcaaggcccaacttatgggcaggcaaaccgatttc
ccgggtaaaaaaccaaagaaaactatcccagagaaagccgcttggatgttggttttactc
aaagataatcaagtcttcttggctaagcgccctcctgccggcatttggggcggactctgg
tgcttccccgaatttagtactcaagccgcactcaatgcagagcttgaagcccagggttat
cacgccgctcaactcgaaccattaatcggttttaggcatacctttagccatttccattta
gatattcaacccatgctactgaatttagatagccaagcgaatggctacaacaagcaaacc
tcaggcatgcagagcgtgggcgcagtcatggaacaaaaccagtctctctggtataacatc
aatcaaccttccaaagtgggactcgccgccgcaaccgagcgcgtgttagccaatttggga
tcactcgtagctattgctagcaacctcgacagtcagtaa
DBGET
integrated database retrieval system
