Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_6050
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Entry
SHJGH_6050 CDS
T02531
Name
(GenBank) putative ATP-dependent DNA helicase
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DUF2800
AAA_11
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AGF65713
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Position
6852413..6855946
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AA seq
1177 aa
AA seq
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MDPPRLDAAQRAVVDHRTGPLLVLAGPGTGKTTTLVESVADRIARGGDPERILVLTFSRK
AAVDLRDRMALRMGAARAPRATTFHSYCYALVRAHQDSGRFTEPLRLLSGPEQDVTVREL
LAGQPELERLGLTHVRWPDELRACLTTRGFADEVRAVLARSRELGLGPEALDAFARRIGR
PDWRAAAAFLAEYLDTLDLQGVLDYAELVHRAVLFARRPETAAGLAAQYDAVYVDEYQDT
DPAQVRLLHALAGGGRTLVAFGDPDQSIYAFRGADVNGILDFPAAFRRADGRPAPVAVLR
TSRRSGAALLAATRLITQRMPLSRLPAEKVRAHREPAAVRDGGRIEVHTYPTPGAEVDNI
ADILRRAHLEDGVPWSDMAVLVRAGSRLPALRRALTAAGVPLDIDGDELPLRYEPAVAPL
LTALRAVATAEARNRDEESARDPEKREPAGEGAGGAPTTHAAGERTEASGVGTEAAAART
EAAGERTEAAAAGTEAAGERTEVGGAGTEAAEARAEAAGVRTESSGEATEAADGPTHAAE
EGAEAPAEPAPDASWLDTETALTLLTSPLAGMDAADLRRLGRALREEERAAGNPLPPPSD
VLLARALAEPERLAVHDPAYARGAQRLGALLRKARERLAGGGTAEEALWDLWQGTPWPGR
LERAARRGGAAGRNADRDLDAVCALFATAARAEERFGGRGALNFLEQIEAEDIAADTLAR
RAVRPDAVRVMTAHRAKGLEWRLVVVAGVQEGLWPDLRRRGSLLEADRIGRDGLAEPLTP
GALLAEERRLFYVAATRARDRLVVTAVKAPADDGDQPSRFLTELGVEPRDVTGRPRRPLS
VAALVAELRATTVDPRASAALREAAARRLARLAALADEDGRPLAPSAHPYRWWGMFDPTE
SKVPLRHKDQPVVLSGSALDQLANTCALQWFLGREVKADAPATTAQGFGNVVHVLADEVA
SGRTPADLDVLMERLDSVWNALAFDAPWKSRQEKDNARVALERFLNWHVLARAGRTPVAS
EHDFDVTLEAGDYQVRIRGQMDRVETDAEGRAYVVDFKTGKQAPTAGEVERHPQLAVYQL
AVREGAVDTAFDGVRPEPGGAELVHLRQGAAKRDGGDSLPKVQTQEPPTGEWVGELLATA
AGKVLDERFTPSAGQHCAHCAFRASCSARPEGRHVVE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtggacccccctcgtctggacgcggcacagcgtgccgtggttgaccaccggaccggacca
ctcctcgtcctcgctggccccggcaccggcaagaccaccacgctggtcgagtccgtggcc
gaccggatcgcccggggcggcgaccccgagcgcatcctggtgctcacgttcagccgcaag
gccgccgtcgacctgcgtgaccgcatggccctgcgcatgggcgccgcccgcgcccccagg
gcgaccacattccattcgtactgctacgcgctggtccgcgcccaccaggacagcggccgg
ttcaccgagccgctgcgcctgctctccggcccggagcaggacgtcaccgtccgggagctg
ctcgccggccagccggagctggagcggctcggcctgacccacgtgcgctggccggacgaa
ctgcgcgcctgcctgaccacgcgtggcttcgccgacgaggtccgtgccgtcctcgcccgc
agccgggagctgggcctcggtccggaggccctggacgccttcgcccgccgcatcggccgc
cccgactggcgggcggcggccgcgttcctcgccgagtacctcgacaccctcgacctccag
ggcgtgctggactacgcggaactggtccaccgcgcggtcctgttcgcccgccgcccggag
accgcggcagggctggccgcccagtacgacgccgtgtacgtcgacgagtaccaggacacc
gaccccgcccaggtccggctgctgcacgccctggcgggcggcgggcgcaccctggtcgcc
ttcggcgaccccgaccagtcgatctacgccttccggggtgccgacgtgaacggcatcctc
gacttcccggccgccttccggcgcgcggacggccgccccgcccccgtcgcggtactgcgc
acctcgcgccgctccggcgccgccctgctggccgcgacccgcctgatcacccagcgcatg
ccgctgtcccggctgcccgccgagaaggtccgcgcccaccgggagccggccgccgtacgg
gacggtggccggatcgaggtccacacgtacccgacgcccggcgcggaagtggacaacatc
gcggacatcctgcgccgcgcgcacctggaggacggcgtcccctggagcgacatggccgtc
ctggtacgcgcgggctctcgtctcccggccctccgccgggccctcaccgcggccggcgtc
cccttggacatcgacggtgacgagctgcccctgcggtacgagcccgcggtcgcaccgctg
ctcactgccctccgcgcggtggccacggcggaggcacggaaccgcgacgaggagtcggcc
agggatccggagaagcgcgaaccggctggtgaaggagccggcggggcgcccaccactcat
gccgcgggggaacgcaccgaagcgagcggggtaggcacggaagccgccgcggcacgtacg
gaagccgccggagaacgcaccgaagccgccgcggcaggtacggaagccgccggagaacgc
actgaagtgggcggggcaggcacggaagccgccgaggcacgcgcggaggccgccggggta
cgcaccgaatccagcggggaagccaccgaagccgccgacggtcccacccatgccgctgaa
gaaggcgccgaagcccccgcggaaccggctccggacgcctcctggctggacaccgagacc
gctctcaccctgctcacctcgccgctcgccgggatggacgccgccgacctgcgccgcctc
gggcgtgccctgcgcgaggaggaacgggccgccgggaaccccctgccgcccccgtccgac
gtactcctcgcgcgggcgctcgcagaacccgagcgcctggccgtgcacgacccggcgtac
gcgcgaggggcgcagcgtctcggcgcgctgctccgcaaggcacgtgagcgcctcgccggc
ggcggtacggccgaggaggcgctgtgggacctgtggcagggcacaccgtggcccggacgc
ctggagcgggccgcccggcgcggtggcgcggccggccggaacgccgaccgggacctggac
gccgtgtgcgcgctgttcgccaccgccgcgcgcgcggaggagcgcttcggaggccgcggc
gcgctgaacttcctggagcagatcgaggccgaggacatagccgccgacacgctcgcccgc
cgcgcggtacgcccggacgccgtccgtgtcatgaccgcgcaccgcgccaagggcctggag
tggcggctggtcgtcgtcgccggcgtccaggagggactctggcccgacctgcggcgccgc
ggctcgctgctggaggccgaccgcatcggccgcgacggactcgccgagccgctcaccccg
ggcgcgctgctcgccgaggaacgccgcctgttctacgtcgccgccacgcgcgcgcgtgac
cgcctcgtcgtcaccgcggtgaaggcaccggccgacgacggcgaccagccgtcccggttc
ctcaccgaactgggcgtcgagccgagggacgtcaccgggcgcccgcgccggccgctgtcc
gtcgccgcgctcgtcgccgaactgcgcgcgaccacggtcgacccgcgcgcgtcggccgcg
ctgcgggaggccgccgcccgccggctcgcccggctcgccgcgctcgccgacgaggacggc
cgcccgctggcgccgtccgcacacccctaccgctggtggggcatgttcgatccgaccgag
agcaaggtgccgctgcgccacaaggaccagcccgtggtgctctccggcagcgccctcgac
cagctcgccaacacctgcgcgttgcagtggttcctgggccgcgaggtgaaggcggacgcc
cccgccaccaccgcgcagggcttcggcaacgtcgtccacgtcctcgccgacgaggtcgcc
tccggccgcacccccgccgacctcgacgtcctcatggaacgcctggactccgtgtggaac
gcgctggccttcgacgcgccgtggaagtcgcggcaggagaaggacaacgcgcgcgtggcg
ctcgaacgcttcctgaactggcacgtgctggcccgcgcgggccggaccccggtggcgagc
gagcacgacttcgacgtcaccctcgaagcgggcgactaccaggtccgcatccgcggccag
atggaccgcgtggagacggacgccgagggccgcgcctacgtggtcgacttcaagaccggc
aagcaggcgcccaccgcgggcgaggtggaacgccacccccagctcgccgtctaccagctc
gccgtccgcgaaggcgccgtcgacacggccttcgacggcgtacgccccgagccgggcggc
gcggagctggtccacctcagacagggcgccgccaagcgggacgggggcgacagcctgccc
aaggtgcagacccaggagccgcccacgggggagtgggtcggcgagctgctggccaccgcc
gccgggaaggtcctcgacgagcggttcacgccgagcgccggccagcactgcgcgcactgc
gcgttccgggcgtcgtgcagcgcgcgcccggagggacggcacgtggtcgagtga
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