Staphylococcus hominis: EGX58_00355
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Entry
EGX58_00355 CDS
T06045
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
shom
Staphylococcus hominis
Pathway
shom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGX58_00355 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shom03019
]
EGX58_00355 (rny)
Messenger RNA biogenesis [BR:
shom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EGX58_00355 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Chordopox_G3
Motif
Other DBs
NCBI-ProteinID:
AYY65435
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All DBs
Position
complement(34784..36343)
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AA seq
519 aa
AA seq
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MNLLDLLLILLGIILGVVVGYFLARNILHQKQIQARQTANDIIKQGQKEADNIKKEKLLE
AKEENQIIREQVETELRERRSELQRQEARNLQKEENLDRKSELLDKKDEILDQKESKIEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLHRVEEELSQDIAVLVKEKERE
AKEKVNKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEEMVDKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSMEVAHLSGMLAAELGEDVSLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGEVETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYEGVEKAFAIQAGREIRVIVSPEEIDD
LKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattagacctcctactcattttgctggggattattctaggggttgttgtaggg
tattttttagcccgaaatatattacatcaaaagcaaattcaagctagacaaactgctaat
gatattatcaaacaaggacaaaaagaagcagataatatcaaaaaagagaaattattagag
gcaaaagaagaaaatcaaattattagagaacaagttgaaacagagctacgtgaaagacgt
agtgagcttcaaagacaagaagcccgaaatcttcaaaaagaggaaaatttagatcgtaaa
tcagaattattggataaaaaagatgagattttagatcaaaaagaatccaaaattgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcagacgttaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaggaagcagttaatgaacaacttcat
agagtggaagaagaactgtcacaagatattgcagtacttgttaaggaaaaggaaagagaa
gcaaaagaaaaagttaacaaaacagcgaaagaattgttagctactactgtacaaagatta
gctgctgatcatacaacggaatctactgtttcagtagttaatttaccaaatgatgagatg
aaaggtcgaattattggtagagaaggtagaaatattcgtactttagaaacgttaacaggt
atcgacttgattattgatgatactcctgaagcagtgattttatctggatttgatcctatt
agacgtgaaatcgctaggactgcattagtgaatttagtctctgatggaagaattcatcca
ggtcgtatcgaagaaatggtagacaaagctagaaaagaagtagatgacatcattagggat
gcaggtgaacaagcaacatttgaaatcaatgttcacaatatgcatccagatttagtgaaa
attttaggtcgtttaaactatagaacaagttacggccaaaatgtcttaaaacattctatg
gaagtcgcacatctttctggaatgttagctgctgaattaggcgaggatgttagtttagca
aaaagagctggattactacatgatgtaggtaaagcaattgatcatgaagttgaaggtagc
catgttgaaattggtgttgaattagctaaaaaatatggtgaagttgaaactgtaattaat
gcgattcattcacatcatggagatgttgaaccaacatctattatttcaattctagtagca
gctgcagatgcattatcggccgcacgtccaggagcacgtaaagaaacacttgaaaattat
attcgtagattagaacgcttagaaactctttcagaaagttatgaaggtgttgaaaaagcg
ttcgcaattcaagctggtagagagattagagttattgtttctcctgaagaaatagatgat
ttaaaatcttaccgattagctagagatataaaaaatcaaattgaagaagaattacaatat
ccaggacatattaaagtgacagttgttagagagactagagcagtagagtatgcgaagtaa
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