Staphylococcus hominis: EGX58_08215
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Entry
EGX58_08215 CDS
T06045
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
shom
Staphylococcus hominis
Pathway
shom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGX58_08215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shom03019
]
EGX58_08215
03009 Ribosome biogenesis [BR:
shom03009
]
EGX58_08215
Enzymes [BR:
shom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EGX58_08215
Messenger RNA biogenesis [BR:
shom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EGX58_08215
Ribosome biogenesis [BR:
shom03009
]
Prokaryotic type
rRNA helicases
EGX58_08215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AYY66905
LinkDB
All DBs
Position
1630008..1631519
Genome browser
AA seq
503 aa
AA seq
DB search
MQNFKELGISDKTVKTLEEMGFKEPTPIQKESIPYTLEGKDILGQAQTGTGKTGAFGIPL
IEKVVGKSGVQALILAPTRELAMQVAEQLREFSRGQNIQVVTVFGGMPIDRQIKALKRGP
QIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTML
FSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLTKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEEVND
RRMKALRPPHRKEVLKAREEDIKDKVKNWMSRESEDRLKRISSELLEEYDSTELVASLLQ
ELVEANDEVEVQLTFEKPLARKSRNNKGNQSRRGGKRNNKFNNKNKRSKGNFNKKKGKKQ
DRRDRQDKRKTSIKGRTFADLQK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaattagggatttcggataaaacggtaaaaaccctagaagaaatg
ggttttaaagaaccaacaccgattcaaaaagaaagtatcccttatacattagaaggaaaa
gatatccttggacaagctcagacaggtacgggtaaaacaggagcttttggtattccttta
atagaaaaagttgttggaaaatcaggtgttcaagctttaattttagcacctacaagagaa
ttagcaatgcaagttgctgaacaattacgcgaattcagtcgtggacaaaatattcaagtt
gttactgtctttggtggtatgccaattgatagacaaattaaagcgttaaaacgtgggcct
caaattgtagtaggaacgccaggacgtgttatcgatcatttgaatcgtcgtacattaaaa
acgaatgatattcatactttaattttagatgaagcggacgaaatgatgaacatgggcttc
attgatgatatgagatttattatggataaaatccctgctgaacaacgacaaacaatgcta
ttttcagcgacaatgcctaaagctattcagacattagtacaacaatttatgaaatcacca
caaattgttaaaacgatgaacaatgaaatgtctgatcctcaaatcgacgaatactataca
attgttaaagagttagagaaatttgatacatttactaatttcttagatgtacatcaacct
gagttagctattgtatttggtagaactaaacgtcgtgtagatgagttaacaagtgcattg
cttactaagggttacaaagcagaaggattacatggagacattacacaagccaaacgttta
gaagtacttaaaaaattcaaaaacgatcaaattgatatattagttgccacagacgttgca
gcacgtggtcttgatatttcaggtgtaagtcacgtatataactttgatatacctcaagat
actgaaagttatacacatagaattggacgtacaggtcgtgcaggtaaagaaggtattgct
gttacgtttgttaacccaattgagatggattacattcgtcaaattgaagaagtcaatgac
agaagaatgaaagctttaagaccacctcatcgtaaagaagtgcttaaagcacgtgaagaa
gatattaaagacaaagttaaaaactggatgtcacgtgagagtgaagatcgtttaaaacgt
atttctagtgaattattagaagaatatgatagcactgaattagtagcttcattattacaa
gaacttgttgaagcaaacgatgaagttgaagttcaattaactttcgaaaagccacttgca
agaaagagtcgtaataataaaggtaatcaatcaagacgtggtggtaaacgaaacaataaa
tttaacaacaaaaataaacgatcaaaaggtaacttcaataagaaaaaaggtaaaaaacaa
gatcgtcgagatagacaagataaaagaaaaacatctatcaaaggtcgtacgtttgctgat
ttacaaaaatag
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