Sturnira hondurensis: 119003506
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Entry
119003506 CDS
T07222
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
shon
Sturnira hondurensis
Pathway
shon03030
DNA replication
shon03420
Nucleotide excision repair
shon03430
Mismatch repair
shon03440
Homologous recombination
shon03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119003506 (RPA1)
03420 Nucleotide excision repair
119003506 (RPA1)
03430 Mismatch repair
119003506 (RPA1)
03440 Homologous recombination
119003506 (RPA1)
03460 Fanconi anemia pathway
119003506 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shon03000
]
119003506 (RPA1)
03032 DNA replication proteins [BR:
shon03032
]
119003506 (RPA1)
03400 DNA repair and recombination proteins [BR:
shon03400
]
119003506 (RPA1)
Transcription factors [BR:
shon03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119003506 (RPA1)
DNA replication proteins [BR:
shon03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119003506 (RPA1)
DNA repair and recombination proteins [BR:
shon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119003506 (RPA1)
MMR (mismatch excision repair)
119003506 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
119003506 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
IBR
DUF223
Motif
Other DBs
NCBI-GeneID:
119003506
NCBI-ProteinID:
XP_036925809
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEDEQLSSNCICQINRFIVNTLKDGRKVVILMELNVLKSAEAVGVKIGNPVPYNE
GHGQQQVAPSPASAASPLASKPPQQNGSSGMGSSASKPYGASKTFGKAGGTSLVNSSAGS
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGRNLPTVQF
DFTKIDDLESKPKDSLVDIIGICKSYEDATRITVKANNREVSKRNIYLMDTSGKVVSATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGTGSVTNWKTLYEVKSENLGQGDKADYFSCVATVVYLRKENSMYQAC
PTPDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADYQDNQWVTCFQESAEAILG
QSTAYLGELKDKNEQAFEEVFQNANFRSFVFKIRVKLETYNDESRIKATVMDVKPVDYRE
YSRRMIMNIRRNAAM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgaaggggccattgcggccataatgcaacagggagacacatcc
ataaaacccattcttcaagtcattaacatccgtcccattactacagggaatagtccgccc
cgctatcgactgcttatgagtgatgggttgaacacgctgtcctctttcatgttggcaaca
cagttgaaccctcttgttgaagatgaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacacgctgaaagatggaaggaaagtcgttattttgatggagttaaat
gttttgaaatcagcagaagcagttggagtaaagattggcaacccagtgccctataatgaa
ggacatgggcagcagcaggtggctccttctccagcctcagcagccagtccactggccagc
aagcccccacagcagaatgggagctcaggaatgggttccagtgcatctaagccttatggt
gcctcaaagacatttggaaaagctggagggaccagcctcgtgaacagttccgcggggtca
caggccaaagtggtgcccatcgccagcctcaccccttaccaatccaagtggactatctgt
gcccgcgtcaccaacaagagtcagatccgtacctggagcaactcccgcggggaagggaag
cttttctctatagaactggttgatgaaagtggtgagatcagagctactgctttcaatgag
caagcggacaagttctttcccctcatcgacgtgaacaaggtctattacttctctaaaggg
actctgaagattgctaacaaacaattcacggctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcgtaacttacctacagtccagttt
gatttcacaaagattgatgacctagagagcaaacctaaggactcacttgtagacataatt
gggatctgcaagagctacgaagatgccactagaatcacagtgaaggctaacaatagagaa
gtgtctaagagaaatatctatttgatggacacgtcagggaaggtggtgtccgctactctg
tggggagaagatgctgacaaatttgatggttctagacaacccgtgatggctatcaaagga
gccagagtgtccgactttggcggacggagcctctctgtgctgtcgtcaagcacagtcatt
gtgaatcctgacatcccagaggcctataagctccgtggatggttcgactcagaaggacaa
gcgttagatggtgtttccatctcagatctaaagagtggaggaacaggaagcgtcaccaac
tggaagactttgtatgaggttaaatcagagaacctgggccaaggggacaaggcagactat
ttcagctgcgtcgcgacggtggtgtatcttcgcaaggagaactccatgtaccaggcctgc
ccgactccggactgcaataagaaagtgattgatcagcagaatggattataccgctgtgag
aaatgtgaccgtgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatattgcc
gattatcaagacaaccagtgggtcacttgcttccaggagtctgcagaggccatcctggga
cagagcactgcttacctgggagagttaaaggacaagaatgagcaggcatttgaggaagtt
ttccagaatgccaactttcgatctttcgtattcaagatcagggtcaaactagagacctac
aatgatgaatctcgaattaaggccacagtgatggacgtgaagcccgtggactacagggaa
tacagcagaaggatgatcatgaacatcaggagaaatgcagccatgtga
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integrated database retrieval system
