Shewanella putrefaciens 200: Sput200_1740
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Entry
Sput200_1740 CDS
T02015
Name
(GenBank) methylcrotonyl-CoA carboxylase, biotin-containing subunit, LiuD
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp00280
Valine, leucine and isoleucine degradation
shp01100
Metabolic pathways
Module
shp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sput200_1740
Enzymes [BR:
shp01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Sput200_1740
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
RimK
HlyD_D23
ATPgrasp_ST
MCC_alpha_BT
ATP-grasp_3
GARS_A
GCV_H
APO_RNA-bind
Motif
Other DBs
NCBI-ProteinID:
ADV54199
UniProt:
E6XI95
LinkDB
All DBs
Position
complement(1975574..1977643)
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AA seq
689 aa
AA seq
DB search
MLTKQMLTNSMFTKLLIANRGEIACRIIKTAQAMGVRTVALYSDADKNARHVAMADESFY
LGGSAPADSYLKGDLIIEIAKKAQAQAIHPGYGFLSENADFARKCEAAGIVFVGPGSEAI
EAMGSKSAAKTIMTAAQVPLVPGYHGDDQTDATLKAEALKIGFPMLIKAAYGGGGKGMRI
VEHEGEIMDAINSARREAASSFGNDKLLLERYLRQPRHVEVQVFADTFGNAIYLSDRDCS
IQRRHQKVVEEAPAPGLSDALRAQMGEAAVAAAKAIDYVGAGTVEFLLDTDNSFYFMEMN
TRLQVEHPVTEMVTGQDLVKWQLMVASGQPLPLKQDEVRIHGHSFEVRIYAEDPQNEFLP
ASGKLNFLREPEQSKYVRIDSGIRENDVISNFYDPMIAKLIVWDESRPRALQRLVHALES
YQISGLKHNIEFLANIAEHPAFAKADFSTDFINRYGDALIGSASSEADTALAFAALYQVL
ARKEAAKAQAINSADPYSPWGQVSGFRLNSVSQHTIALLDDAHELQQLVLLDFGDHYLLS
QPQLSQPTDAGQVSKSLSGELKQDLLLAEINGHKSKVPVSAQGDDFTLFLPSGSYHFRAV
KTQVVEAQSSNEDKLKAPMNGTVVTHLVEVGAEVKAGQGLLVMEAMKMEYTIEAPFDGIV
TEFYFKAGELVSDGAVLLHVEPKAQSEEA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagcagatgttgactaacagcatgttcactaagcttttaattgctaatcgt
ggtgaaattgcctgccgtattatcaaaaccgcgcaggccatgggcgttcgcaccgttgcc
ttatattccgatgccgataaaaacgcccgccatgttgccatggccgacgaatcgttttac
ttaggtggcagcgctccagcggattcttacctgaagggcgacttgattattgaaatcgcc
aaaaaagcccaggcacaagccattcacccaggttatggttttttatcggaaaacgccgat
tttgcccgcaagtgtgaggccgccggaatcgtgtttgttggcccaggcagcgaggccatc
gaggccatgggcagcaagagcgcagccaaaaccattatgacggcagcgcaagtgccttta
gtgccaggttaccatggagacgatcaaaccgatgccaccctcaaggccgaagccttaaaa
atcggcttcccgatgctgataaaagccgcctacggtggcggtggcaaaggcatgcgtatt
gttgagcatgaaggcgaaatcatggacgccatcaactcggcgcgccgtgaagcggcctcc
tccttcggtaacgataaattattgctggagcgttacttgcgccagcctcgccatgtcgaa
gtgcaagtgttcgccgatacctttggcaatgcgatttacttatcggatcgcgactgttcg
attcagcgccgccatcaaaaagtggtcgaagaagcgccagcaccggggttaagcgatgca
ttgcgcgcccaaatgggtgaagcggccgtcgcggcagccaaagccatcgattatgttggc
gcaggcactgtggagtttctgctcgacacagacaatagcttctatttcatggagatgaac
acccgtctgcaggttgagcatccagtgactgaaatggtgacgggccaagatttagtgaaa
tggcaattgatggtcgccagtggtcagccattgccccttaagcaagatgaagtgcggatc
cacggccattcctttgaagtgcgtatttatgccgaagatccacagaatgagtttttaccc
gccagcggtaagctcaacttcctgcgcgagcccgagcaaagcaaatacgtgcgtatcgat
tcgggcattcgtgaaaacgatgtgatcagtaacttctacgatcctatgatcgccaaactg
attgtgtgggatgagtcgcgtccgcgcgcgctgcaacgcctagtgcatgccctcgagtcc
taccaaatcagtgggcttaaacacaatattgaatttttagccaatattgccgagcatccc
gcctttgccaaggcggactttagcaccgactttattaaccgttacggcgatgcactgatt
ggcagtgcttcgagcgaagccgacactgcgcttgcctttgccgcgctgtatcaagtgctt
gcccgtaaagaagcggccaaggcacaggcgattaatagcgccgatccttactcgccttgg
ggccaagtcagtggctttagactcaacagcgtcagccagcatactattgccctgctcgac
gatgcccacgagttacaacaattggtgctattagactttggcgatcactacctattatca
cagcctcagttatctcagccaactgacgcaggccaagtgagcaagtccctcagtggtgag
cttaagcaggatttactgttagccgaaatcaacggccataagagtaaagtgcccgtcagt
gctcagggagatgattttacgctatttttaccctctggcagttatcacttcagggcggtt
aaaacccaagtggttgaggcgcagtccagcaatgaagataagctcaaggccccaatgaat
ggcacagttgtcacccacttggtggaagtcggggctgaggttaaggccggacaagggcta
ctggtaatggaagcgatgaagatggaatacaccatcgaagcgcccttcgacggtatcgtt
accgagttctactttaaggcgggcgagttagtgagcgatggcgccgtgctgctccatgtt
gagcccaaagcccaaagcgaggaagcctaa
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