Shigella sp. PAMC 28760: A0259_05065
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Entry
A0259_05065 CDS
T04390
Name
(GenBank) porin
KO
K11929
outer membrane pore protein E
Organism
shq
Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shq02000
]
A0259_05065
Transporters [BR:
shq02000
]
Other transporters
Pores ion channels [TC:
1
]
A0259_05065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
AMR22043
LinkDB
All DBs
Position
complement(1043685..1044722)
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AA seq
345 aa
AA seq
DB search
MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNDSKDGDQSYIRFG
FKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALY
DVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRD
VKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDAN
NIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDE
DLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagcactctggcattagtggtgatgggcattgtggcatctgcatccgtacag
gccgcagaaatatataacaaagacggtaataaactggatgtctatggcaaagttaaagcc
atgcattatatgagtgataacgacagtaaagatggcgaccagagttatatccgttttggt
tttaaaggcgaaacacaaattaacgatcaactgactggttatggtcgttgggaagcagag
tttgccggtaataaagcagagagtgatactgcacagcaaaaaacgcgtctcgcttttgcc
gggttgaaatataaagatttgggttctttcgattatggtcgtaacctgggcgcgttgtat
gacgtggaagcctggaccgatatgttcccggaatttggtggcgactcctcggcgcagacc
gacaactttatgaccaaacgcgccagcggtctggcgacgtatcggaacaccgacttcttc
ggcgttatcgatggcctgaacttaaccctgcaatatcaagggaaaaacgaaaaccgcgac
gttaaaaagcaaaacggcgatggcttcggcacgtcattgacatatgactttggcggcagc
gatttcgccattagtggggcctataccaactcagatcgcaccaacgagcagaacctgcaa
agccgtggcacaggcaagcgtgcagaagcatgggctacaggtctgaaatacgatgccaat
aatatttatctggcaactttttattctgaaacacgcaaaatgacgccaataactggcggc
tttgccaataagacacagaactttgaagcggtcgctcaataccagtttgactttggtctg
cgtccttcgctgggttatgtcttatcgaaagggaaagatattgaaggtatcggtgatgaa
gatctggtcaattatatcgatgtcggggctacgtattatttcaacaaaaatatgtcagcg
tttgttgattataaaatcaaccaactggatagcgataacaaattgaatattaataatgat
gatattgtcgcggggtaa
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